RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 TCEAL4Q96EI5 215 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 PPP1R10Q96QC0 940 aaKnown RBP14.21□□□□□ -0.13
LINC00339-203ENST00000420503 HEBP1Q9NRV9 189 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 MTRRQ9UBK8 725 aa14.21□□□□□ -0.13
LINC00339-203ENST00000420503 COL4A2P08572 1712 aa14.21□□□□□ -0.14
LINC00339-203ENST00000420503 N4BP3O15049 544 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 B3GAT3O94766 335 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 C1RP00736 705 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 FCARP24071 287 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 CREMQ03060 361 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 FZD5Q13467 585 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 GRM2Q14416 872 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 NBR1Q14596 966 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 RSPO4Q2I0M5 234 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-203ENST00000420503 TANGO2Q6ICL3 276 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-203ENST00000420503 ZBTB8OSQ8IWT0 167 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 PRIMPOLQ96LW4 560 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 SEMA4AQ9H3S1 761 aa14.2□□□□□ -0.14
LINC00339-203ENST00000420503 ACKR2O00590 384 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 SEC24AO95486 1093 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 RHOP08100 348 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 HOXA9P31269 272 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 HOXC13P31276 330 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 CCR2P41597 374 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 OSTNP61366 133 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 ZNF174Q15697 407 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 DEPTORQ8TB45 409 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 ZMAT2Q96NC0 199 aaKnown RBP14.19□□□□□ -0.14
LINC00339-203ENST00000420503 DLL3Q9NYJ7 618 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 MRPS23Q9Y3D9 190 aaKnown RBP14.19□□□□□ -0.14
LINC00339-203ENST00000420503 ACACBO00763 2458 aa14.19□□□□□ -0.14
LINC00339-203ENST00000420503 SDK1Q7Z5N4 2213 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 TICRRQ7Z2Z1 1910 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
LINC00339-203ENST00000420503 LAMTOR5O43504 91 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 KINO60870 393 aaKnown RBP14.18□□□□□ -0.14
LINC00339-203ENST00000420503 XYLBO75191 536 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 GJA1P17302 382 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 CYP11B2P19099 503 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 ARPP19P56211 112 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 ROR1Q01973 937 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 LPAL2Q16609 132 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 MAPK6Q16659 721 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 UPP1Q16831 310 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 ZC3H14Q6PJT7 736 aaKnown RBP14.18□□□□□ -0.14
LINC00339-203ENST00000420503 MTSS1LQ765P7 747 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 TAS1R3Q7RTX0 852 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 MCPH1Q8NEM0 835 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 SHDQ96IW2 340 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 ZSWIM3Q96MP5 696 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 BCO2Q9BYV7 579 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 BRMS1Q9HCU9 246 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 TUFT1Q9NNX1 390 aa14.18□□□□□ -0.14
LINC00339-203ENST00000420503 ZFP37Q9Y6Q3 630 aaPredicted RBP14.18□□□□□ -0.14
LINC00339-203ENST00000420503 SMIM28A0A1B0GU29 152 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 ARHGEF35A5YM69 484 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 TMEM189-UBE2V1I3L0A0 370 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 XRCC6P12956 609 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00339-203ENST00000420503 NAMPTP43490 491 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 PRKCQQ04759 706 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 MTAPQ13126 283 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 PUM1Q14671 1186 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00339-203ENST00000420503 FAM78AQ5JUQ0 283 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 PRSS36Q5K4E3 855 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 ATF7IP2Q5U623 682 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 ZNF687Q8N1G0 1237 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 WASF1Q92558 559 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 C18orf25Q96B23 403 aaPredicted RBP14.17□□□□□ -0.14
LINC00339-203ENST00000420503 CORO1BQ9BR76 489 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 POLR3CQ9BUI4 534 aaPredicted RBP14.17□□□□□ -0.14
LINC00339-203ENST00000420503 CDT1Q9H211 546 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 PARD6AQ9NPB6 346 aa14.17□□□□□ -0.14
LINC00339-203ENST00000420503 NDRG2Q9UN36 371 aaKnown RBP14.17□□□□□ -0.14
LINC00339-203ENST00000420503 SMG5Q9UPR3 1016 aaKnown RBP14.17□□□□□ -0.14
LINC00339-203ENST00000420503 MAP1BP46821 2468 aaKnown RBP14.16□□□□□ -0.14
LINC00339-203ENST00000420503 CITO14578 2027 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 MOSPD3O75425 235 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 TGM1P22735 817 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 ELAVL2Q12926 359 aaKnown RBP14.16□□□□□ -0.14
LINC00339-203ENST00000420503 SEZ6Q53EL9 994 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 VARS2Q5ST30 1063 aaKnown RBP14.16□□□□□ -0.14
LINC00339-203ENST00000420503 GPIHBP1Q8IV16 184 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 DAW1Q8N136 415 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 ZBTB44Q8NCP5 570 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 NELL1Q92832 810 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 CLDN23Q96B33 292 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 CNTNAP3BQ96NU0 1288 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 NACC1Q96RE7 527 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 ADPGKQ9BRR6 497 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 CNTNAP3Q9BZ76 1288 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 C2orf40Q9H1Z8 148 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 BHMT2Q9H2M3 363 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 NCDNQ9UBB6 729 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 KCNH3Q9ULD8 1083 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 BACE2Q9Y5Z0 518 aa14.16□□□□□ -0.14
LINC00339-203ENST00000420503 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
LINC00339-203ENST00000420503 PODXLO00592 558 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms