RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 RTL10Q7L3V2 364 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 CEP57Q86XR8 500 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 TPH2Q8IWU9 490 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 SLFN12Q8IYM2 578 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 ZNF274Q96GC6 653 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 PRIMPOLQ96LW4 560 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 NAP1L4Q99733 375 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 HSD17B14Q9BPX1 270 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 EIF2AK1Q9BQI3 630 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 RTKNQ9BST9 563 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 POLR3FQ9H1D9 316 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 ANKEF1Q9NU02 776 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 GDE1Q9NZC3 331 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 MTRRQ9UBK8 725 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 POLIQ9UNA4 740 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 VWA8A3KMH1 1905 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 COL4A2P08572 1712 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 TMEM189-UBE2V1I3L0A0 370 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 NCAM2O15394 837 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 RECQL4O94761 1208 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 ADRB1P08588 477 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 FGFR3P22607 806 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 OR1D2P34982 312 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 ADCY1Q08828 1119 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 MTAPQ13126 283 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 FAM187BQ17R55 369 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 ZNF852Q6ZMS4 543 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 ING5Q8WYH8 240 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 PLA2G2FQ9BZM2 168 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 FZD8Q9H461 694 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 PDZD7Q9H5P4 517 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 ZSWIM6Q9HCJ5 1215 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 AVENQ9NQS1 362 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
TNFAIP3-202ENST00000420009 DCDC2BA2VCK2 349 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 MARCH6O60337 910 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 THP07101 528 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 RHOP08100 348 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 FCARP24071 287 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 ELSPBP1Q96BH3 223 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 IER2Q9BTL4 223 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 CHRDQ9H2X0 955 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 GPRC5CQ9NQ84 441 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 HEBP1Q9NRV9 189 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 GJB4Q9NTQ9 266 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 SNTG2Q9NY99 539 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 GMEB2Q9UKD1 530 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 USP18Q9UMW8 372 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 MRPS23Q9Y3D9 190 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 BACE2Q9Y5Z0 518 aa11.28□□□□□ -0.6
TNFAIP3-202ENST00000420009 ARHGEF37A1IGU5 675 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 LRRIQ4A6NIV6 560 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 N4BP3O15049 544 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 USO1O60763 962 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 BAG4O95429 457 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 CEBPBP17676 345 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 IGFBP6P24592 240 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 RBM25P49756 843 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 TANGO2Q6ICL3 276 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 CD300LGQ6UXG3 332 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 CENPQQ7L2Z9 268 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 TNFRSF25Q93038 417 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 MCRS1Q96EZ8 462 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 DDX27Q96GQ7 796 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 CCDC43Q96MW1 224 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.61
TNFAIP3-202ENST00000420009 MAP1BP46821 2468 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 SLC30A4O14863 429 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 LRP3O75074 770 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 CDKL5O76039 1030 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 B3GAT3O94766 335 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 REC8O95072 547 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 EDN1P05305 212 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 XRCC6P12956 609 aaKnown RBP eCLIP11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 STK3Q13188 491 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 LAIR1Q6GTX8 287 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 SLC8B1Q6J4K2 584 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 ANKS3Q6ZW76 656 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 NOSTRINQ8IVI9 506 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 ZBTB8OSQ8IWT0 167 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 MCPH1Q8NEM0 835 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 NETO1Q8TDF5 533 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 PIGOQ8TEQ8 1089 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 PPP1R10Q96QC0 940 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 CCDC113Q9H0I3 377 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 TRPV5Q9NQA5 729 aa11.26□□□□□ -0.61
TNFAIP3-202ENST00000420009 PCDHA12Q9UN75 941 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms