RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 MCCD1P59942 119 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-208ENST00000419606 SOX4Q06945 474 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-208ENST00000419606 NAB2Q15742 525 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 PTPN21Q16825 1174 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 MIIPQ5JXC2 388 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 HACE1Q8IYU2 909 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 TMC2Q8TDI7 906 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 NAP1L5Q96NT1 182 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-208ENST00000419606 CASD1Q96PB1 797 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 GDF15Q99988 308 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 TUBGCP2Q9BSJ2 902 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 PLEKHA5Q9HAU0 1116 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 GOLGA2P5Q9HBQ8 144 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 METTL14Q9HCE5 456 aaKnown RBP13.9□□□□□ -0.18
ATG4B-208ENST00000419606 TUBGCP4Q9UGJ1 667 aa13.9□□□□□ -0.18
ATG4B-208ENST00000419606 LIMA1Q9UHB6 759 aaKnown RBP13.9□□□□□ -0.18
ATG4B-208ENST00000419606 EFCAB14O75071 495 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 LRRN2O75325 713 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 DGKIO75912 1065 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 PRKCSHP14314 528 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-208ENST00000419606 KCNE1P15382 129 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 TNNI1P19237 187 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 IGFBP6P24592 240 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-208ENST00000419606 CLDN10P78369 228 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 TFAMQ00059 246 aaKnown RBP13.89□□□□□ -0.19
ATG4B-208ENST00000419606 FANCCQ00597 558 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 KCNH2Q12809 1159 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 ZBTB6Q15916 424 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 CBWD6Q4V339 395 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 PAN2Q504Q3 1202 aaKnown RBP13.89□□□□□ -0.19
ATG4B-208ENST00000419606 CBWD3Q5JTY5 395 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 CBWD5Q5RIA9 395 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 FAM109BQ6ICB4 259 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-208ENST00000419606 ZNF280BQ86YH2 543 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 RABGGTAQ92696 567 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 PPP1R10Q96QC0 940 aaKnown RBP13.89□□□□□ -0.19
ATG4B-208ENST00000419606 FNBP1Q96RU3 617 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 RPS6KC1Q96S38 1066 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 MTMR12Q9C0I1 747 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 ASB7Q9H672 318 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 UBN1Q9NPG3 1134 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 INTS13Q9NVM9 706 aa13.89□□□□□ -0.19
ATG4B-208ENST00000419606 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.89□□□□□ -0.19
ATG4B-208ENST00000419606 CEP290O15078 2479 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 TBKBP1A7MCY6 615 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 PPEF2O14830 753 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 INPPL1O15357 1258 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 DDHD2O94830 711 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
ATG4B-208ENST00000419606 TPM4P67936 248 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 POU5F1Q01860 360 aaKnown RBP13.88□□□□□ -0.19
ATG4B-208ENST00000419606 TMEM132DQ14C87 1099 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 MAN2A1Q16706 1144 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 NOMO2Q5JPE7 1267 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
ATG4B-208ENST00000419606 GLB1LQ6UWU2 654 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 FAM43BQ6ZT52 329 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-208ENST00000419606 WDR49Q8IV35 697 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 CD302Q8IX05 232 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 ZNF689Q96CS4 500 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-208ENST00000419606 UBE2OQ9C0C9 1292 aaKnown RBP13.88□□□□□ -0.19
ATG4B-208ENST00000419606 TMEM117Q9H0C3 514 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■■■ 96.1
ATG4B-208ENST00000419606 TBC1D13Q9NVG8 400 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 SLC4A7Q9Y6M7 1214 aa13.88□□□□□ -0.19
ATG4B-208ENST00000419606 GBF1Q92538 1859 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 LRRC10BA6NIK2 292 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
ATG4B-208ENST00000419606 TEX33O43247 280 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 VNN1O95497 513 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 CST3P01034 146 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-208ENST00000419606 AFPP02771 609 aaKnown RBP13.87□□□□□ -0.19
ATG4B-208ENST00000419606 THP07101 528 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 FMO5P49326 533 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 SURF1Q15526 300 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 C15orf39Q6ZRI6 1047 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 SV2AQ7L0J3 742 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 C1orf127Q8N9H9 656 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 CXorf38Q8TB03 319 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
ATG4B-208ENST00000419606 PAAF1Q9BRP4 392 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 NDST4Q9H3R1 872 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 RC3H2Q9HBD1 1191 aaKnown RBP13.87□□□□□ -0.19
ATG4B-208ENST00000419606 IFNKQ9P0W0 207 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 DNAJB4Q9UDY4 337 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 SIX4Q9UIU6 781 aa13.87□□□□□ -0.19
ATG4B-208ENST00000419606 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
ATG4B-208ENST00000419606 CASTOR2A6NHX0 329 aa13.86□□□□□ -0.19
ATG4B-208ENST00000419606 F8W810 466 aa13.86□□□□□ -0.19
ATG4B-208ENST00000419606 GJB5O95377 273 aa13.86□□□□□ -0.19
ATG4B-208ENST00000419606 SERPINC1P01008 464 aa13.86□□□□□ -0.19
ATG4B-208ENST00000419606 ITGB3P05106 788 aa13.86□□□□□ -0.19
ATG4B-208ENST00000419606 TMEM191BP0C7N4 346 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms