RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 RIN2Q8WYP3 895 aaPredicted RBP13.88□□□□□ -0.19
LINC00642-201ENST00000419459 ZBTB9Q96C00 473 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 CPB2Q96IY4 423 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
LINC00642-201ENST00000419459 CDY2AQ9Y6F7 541 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 TULP1O00294 542 aaPredicted RBP13.88□□□□□ -0.19
LINC00642-201ENST00000419459 ENC1O14682 589 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 ASAP2O43150 1006 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 KIAA0754O94854 1291 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 CYP2J2P51589 502 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 TRIM60Q495X7 471 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 RDH13Q8NBN7 331 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 TRIM58Q8NG06 486 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 CAVIN3Q969G5 261 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 CABS1Q96KC9 395 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 ACCSQ96QU6 501 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 HAPLN2Q9GZV7 340 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 CXorf56Q9H5V9 222 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 AGPAT3Q9NRZ7 376 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 TYW1Q9NV66 732 aaKnown RBP13.88□□□□□ -0.19
LINC00642-201ENST00000419459 TET1Q8NFU7 2136 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 SCN5AQ14524 2016 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 HARSP12081 509 aaKnown RBP13.87□□□□□ -0.19
LINC00642-201ENST00000419459 EIF4BP23588 611 aaKnown RBP13.87□□□□□ -0.19
LINC00642-201ENST00000419459 CASP4P49662 377 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 LIG4P49917 911 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 MRPS6P82932 125 aaKnown RBP13.87□□□□□ -0.19
LINC00642-201ENST00000419459 SNX17Q15036 470 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 SEZ6Q53EL9 994 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 ZNF618Q5T7W0 954 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 C1orf131Q8NDD1 294 aaKnown RBP13.87□□□□□ -0.19
LINC00642-201ENST00000419459 SLC17A8Q8NDX2 589 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 RUFY1Q96T51 708 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 THAP9Q9H5L6 903 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 TMEM206Q9H813 350 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 TRIM10Q9UDY6 481 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 UMODL1Q5DID0 1318 aa13.87□□□□□ -0.19
LINC00642-201ENST00000419459 BICDL2A1A5D9 508 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 GOLGA8IPA6NC78 632 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 GOLGA8JA6NMD2 632 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 PDXKO00764 312 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 NR3C1P04150 777 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 MYBL2P10244 700 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 CKBP12277 381 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 EFNA5P52803 228 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 PTK7Q13308 1070 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 ADAM9Q13443 819 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 ALCAMQ13740 583 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 AMHR2Q16671 573 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 LRRC26Q2I0M4 334 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 GLE1Q53GS7 698 aaKnown RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 WDR59Q6PJI9 974 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 LRRC55Q6ZSA7 311 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 ZNF410Q86VK4 478 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 IRF2BP1Q8IU81 584 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 SAAL1Q96ER3 474 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 NFKBIZQ9BYH8 718 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 CELF4Q9BZC1 486 aaKnown RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 FZD8Q9H461 694 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 TRAF3IP3Q9Y228 551 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 UBE4BO95155 1302 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 M0QZ92 97 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 MEFVO15553 781 aaPredicted RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 HSF2BPO75031 334 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 DARSP14868 501 aaKnown RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 ARF4P18085 180 aaPredicted RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 PPP1R2P41236 205 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 TLE2Q04725 743 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 PTPN11Q06124 597 aaPredicted RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 KIF5AQ12840 1032 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 PRPF4BQ13523 1007 aaKnown RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 TRIM71Q2Q1W2 868 aaKnown RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 FIGNQ5HY92 759 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 ZBTB33Q86T24 672 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 RSPH3Q86UC2 560 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 CCDC155Q8N6L0 562 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 TSG101Q99816 390 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 GCOM2Q9BZD3 368 aaPredicted RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 C2orf40Q9H1Z8 148 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 C11orf49Q9H6J7 331 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 TMEM134Q9H6X4 195 aa13.86□□□□□ -0.19
LINC00642-201ENST00000419459 TNRC18O15417 2968 aaPredicted RBP13.86□□□□□ -0.19
LINC00642-201ENST00000419459 CEP290O15078 2479 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 H0YCG3 227 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 TSPAN1O60635 241 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 SRGAP2O75044 1071 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 CD4P01730 458 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 CCDC172P0C7W6 258 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 GHRP10912 638 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 TCP1P17987 556 aaKnown RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 MATR3P43243 847 aaKnown RBP eCLIP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms