RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 PON1P27169 355 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ANXA13P27216 316 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 STAT1P42224 750 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ACOT2P49753 483 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ACLYP53396 1101 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 CRYBB1P53674 252 aaPredicted RBP6.44□□□□□ -1.38
HMGB3-202ENST00000419110 YARSP54577 528 aaKnown RBP6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ADAM17P78536 824 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 CDK17Q00537 523 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 POU5F1Q01860 360 aaKnown RBP6.44□□□□□ -1.38
HMGB3-202ENST00000419110 SNX17Q15036 470 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 KCNA10Q16322 511 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 AMHR2Q16671 573 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 NBPF20Q3BBV1 942 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ARHGAP29Q52LW3 1261 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 KLHDC7AQ5VTJ3 777 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 EEF1DP3Q658K8 133 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 SLC27A1Q6PCB7 646 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ENOSF1Q7L5Y1 443 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 KIAA1328Q86T90 577 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 SERINC5Q86VE9 423 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 THNSL1Q8IYQ7 743 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 CCDC170Q8IYT3 715 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 NME8Q8N427 588 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ARRDC4Q8NCT1 418 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ZSWIM2Q8NEG5 633 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 KIAA1524Q8TCG1 905 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 BAP1Q92560 729 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 SYN2Q92777 582 aaPredicted RBP6.44□□□□□ -1.38
HMGB3-202ENST00000419110 SEZ6LQ9BYH1 1024 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 TMEM117Q9H0C3 514 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 MINDY3Q9H8M7 445 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 STARD7Q9NQZ5 370 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 SPTLC3Q9NUV7 552 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 CPSF3Q9UKF6 684 aaKnown RBP6.44□□□□□ -1.38
HMGB3-202ENST00000419110 R3HCC1Q9Y3T6 440 aaKnown RBP6.44□□□□□ -1.38
HMGB3-202ENST00000419110 CDY2AQ9Y6F7 541 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ATP8B3O60423 1300 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 MROH7Q68CQ1 1323 aa6.44□□□□□ -1.38
HMGB3-202ENST00000419110 ALPK3Q96L96 1907 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 SSU72P8A0A1W2PR75 194 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 DNM1LO00429 736 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 XPOTO43592 962 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 AKR1B10O60218 316 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 FAM189A1O60320 539 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 LRRN2O75325 713 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 GPR32O75388 356 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 NPTXRO95502 500 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 HLA-DRAP01903 254 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 SERPING1P05155 500 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 CLTAP09496 248 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 ACTN1P12814 892 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 SLC9A1P19634 815 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 EIF4BP23588 611 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 TBXAS1P24557 533 aaPredicted RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 HNRNPH3P31942 346 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 GRM5P41594 1212 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PDE6CP51160 858 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 KIF11P52732 1056 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 JAM2P57087 298 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 YWHAEP62258 255 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 NOP14P78316 857 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 DLG4P78352 724 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 KRT83P78385 493 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 TFAMQ00059 246 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PPP3CAQ08209 521 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 KLHL30Q0D2K2 578 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 KCNMA1Q12791 1236 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PAK2Q13177 524 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PTK7Q13308 1070 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 TRPC3Q13507 836 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 ITGA7Q13683 1181 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 TMEM132DQ14C87 1099 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 SPA17Q15506 151 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 ENOX2Q16206 610 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PTGISQ16647 500 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 ZACNQ401N2 412 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 WDR44Q5JSH3 913 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 DNTTIP2Q5QJE6 756 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 ZBTB41Q5SVQ8 909 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 LMBRD2Q68DH5 695 aaPredicted RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 TWF2Q6IBS0 349 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 IQCEQ6IPM2 695 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 GDF6Q6KF10 455 aaPredicted RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 NT5DC4Q86YG4 428 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 CCAR2Q8N163 923 aaKnown RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PPM1KQ8N3J5 372 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 EHBP1Q8NDI1 1231 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PLEKHO2Q8TD55 490 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 SH3TC2Q8TF17 1288 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PPP1R13LQ8WUF5 828 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 CPB2Q96IY4 423 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 ZBTB45Q96K62 511 aaPredicted RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 PPP1R13BQ96KQ4 1090 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 CCDC42Q96M95 316 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 C16orf45Q96MC5 204 aaPredicted RBP6.43□□□□□ -1.38
HMGB3-202ENST00000419110 DESI2Q9BSY9 194 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 TSGA10Q9BZW7 698 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 MTMR12Q9C0I1 747 aa6.43□□□□□ -1.38
HMGB3-202ENST00000419110 SENP6Q9GZR1 1112 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms