RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 NSUN2Q08J23 767 aaKnown RBP eCLIP17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 AP1B1Q10567 949 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 NXNQ6DKJ4 435 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 ITPRIPL1Q6GPH6 555 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 KDM1AO60341 852 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 ITGB3P05106 788 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 SMIM10L2AP0DMW4 78 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 SMIM10L2BP0DMW5 78 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 NAMPTP43490 491 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 PAPOLAP51003 745 aaKnown RBP17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 PRKCZQ05513 592 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 GOLGA7BQ2TAP0 167 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 ZNF579Q8NAF0 562 aaKnown RBP17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 DHX35Q9H5Z1 703 aaKnown RBP17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 ITM2BQ9Y287 266 aa17.97■□□□□ 0.47
SYNGAP1-202ENST00000418600 MSH4O15457 936 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 LGALS2P05162 132 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 NPEPPSP55786 919 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 C10orf76Q5T2E6 689 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 ZNF410Q86VK4 478 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 SLC7A14Q8TBB6 771 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 PHF20Q9BVI0 1012 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 PDGFDQ9GZP0 370 aaPredicted RBP17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 CREBZFQ9NS37 354 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 HYOU1Q9Y4L1 999 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 MYMKA6NI61 221 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 SNX1Q13596 522 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 ZNF697Q5TEC3 545 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 MEI1Q5TIA1 1274 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 OOSP2Q86WS3 158 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 HVCN1Q96D96 273 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 C11orf70Q9BRQ4 267 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 GJB4Q9NTQ9 266 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 FAM49BQ9NUQ9 324 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 PLA2G4CQ9UP65 541 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 RGS7P49802 495 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 PSMC6P62333 389 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 CRHR2Q13324 411 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 CDR2LQ86X02 465 aaPredicted RBP17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 CDK5RAP1Q96SZ6 601 aaKnown RBP17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 IFT172Q9UG01 1749 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 LARGE1O95461 756 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 RAB30Q15771 203 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 IGDCC4Q8TDY8 1250 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 REEP2Q9BRK0 252 aa17.96■□□□□ 0.47
SYNGAP1-202ENST00000418600 KIF3CO14782 793 aa17.96■□□□□ 0.46
SYNGAP1-202ENST00000418600 SERPINB6P35237 376 aa17.96■□□□□ 0.46
SYNGAP1-202ENST00000418600 TRIM72Q6ZMU5 477 aa17.96■□□□□ 0.46
SYNGAP1-202ENST00000418600 RGL4Q8IZJ4 473 aa17.96■□□□□ 0.46
SYNGAP1-202ENST00000418600 CARNMT1Q8N4J0 409 aa17.96■□□□□ 0.46
SYNGAP1-202ENST00000418600 MCUR1Q96AQ8 359 aa17.96■□□□□ 0.46
SYNGAP1-202ENST00000418600 HAUS8Q9BT25 410 aa17.96■□□□□ 0.46
SYNGAP1-202ENST00000418600 TLE6Q9H808 572 aa17.96■□□□□ 0.46
SYNGAP1-202ENST00000418600 NRCAMQ92823 1304 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 YWHAHQ04917 246 aaPredicted RBP17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 CERS4Q9HA82 394 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 FMN2Q9NZ56 1722 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 ZNF177Q13360 481 aaPredicted RBP17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 TFDP2Q14188 446 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 ADGRF2Q8IZF7 708 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 C17orf75Q9HAS0 396 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 CDY2AQ9Y6F7 541 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 WEE1P30291 646 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 GUCY1A2P33402 732 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 ITGA7Q13683 1181 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 THEMIS2Q5TEJ8 643 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 KIFC3Q9BVG8 833 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 PARNO95453 639 aaKnown RBP17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 MYBL1P10243 752 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 LHX1P48742 406 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 DNAJC21Q5F1R6 531 aaKnown RBP17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 MAP3K21Q5TCX8 1036 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 APBB2Q92870 758 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 CNOT8Q9UFF9 292 aaKnown RBP17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 TLK1Q9UKI8 766 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 ADAMTSL3P82987 1691 aa17.95■□□□□ 0.46
SYNGAP1-202ENST00000418600 PRKCQQ04759 706 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 RESTQ13127 1097 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 SNRNP35Q16560 246 aaKnown RBP17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 AMHR2Q16671 573 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 CFAP36Q96G28 342 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 PCDHB5Q9Y5E4 795 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 ARP10275 920 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 SNRPFP62306 86 aaKnown RBP17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 LAMTOR4Q0VGL1 99 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 CRY2Q49AN0 593 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 RABGAP1LQ5R372 815 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 PALB2Q86YC2 1186 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 LMNTD2Q8IXW0 634 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 CDC26Q8NHZ8 85 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 ARNTL2Q8WYA1 636 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 NFKBIZQ9BYH8 718 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 SARS2Q9NP81 518 aaKnown RBP17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 AKAP7Q9P0M2 348 aaPredicted RBP17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 TMTC4Q5T4D3 741 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 ADH1AP07327 375 aa17.94■□□□□ 0.46
SYNGAP1-202ENST00000418600 PSRC1Q6PGN9 363 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms