RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PFASO15067 1338 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 C11orf96Q7Z7L8 435 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 SPATA16Q9BXB7 569 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 GLI2P10070 1586 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 BAATQ14032 418 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-205ENST00000418258 CCDC137Q6PK04 289 aaKnown RBP11.82□□□□□ -0.52
PTCH1-205ENST00000418258 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 TNS3Q68CZ2 1445 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 KDM6AO15550 1401 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-205ENST00000418258 C3orf70A6NLC5 250 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-205ENST00000418258 CETPP11597 493 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 BEND6Q5SZJ8 279 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-205ENST00000418258 ST13P4Q8IZP2 240 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-205ENST00000418258 STX19Q8N4C7 294 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 SCAF8Q9UPN6 1271 aaKnown RBP11.81□□□□□ -0.52
PTCH1-205ENST00000418258 MEFVO15553 781 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-205ENST00000418258 PJA2O43164 708 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 CASP8Q14790 479 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 HIF1AQ16665 826 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 KIZQ2M2Z5 673 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 CLMNQ96JQ2 1002 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 ZFATQ9P243 1243 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 SUPT3HO75486 399 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 PMS2P54278 862 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 SV2CQ496J9 727 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 TMCO5AQ8N6Q1 288 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 BHMTQ93088 406 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 FCGRTP55899 365 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 SNX31Q8N9S9 440 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 ZNF189O75820 626 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-205ENST00000418258 ALDH1A2O94788 518 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 CENPAP49450 140 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 CCDC15Q0P6D6 951 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 EFCAB12Q6NXP0 572 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 ATP11CQ8NB49 1132 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 MAGEB2O15479 319 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 CAPZA2P47755 286 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 EPHA10Q5JZY3 1008 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 GTF3C2Q8WUA4 911 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-205ENST00000418258 C1orf54Q8WWF1 131 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 PHF21AQ96BD5 680 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 ZFP42Q96MM3 310 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 ZSCAN32Q9NX65 697 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 PP2D1A8MPX8 630 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 AP3B1O00203 1094 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 CYP26A1O43174 497 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 SESN2P58004 480 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-205ENST00000418258 MED21Q13503 144 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 PHKG1Q16816 387 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 EMBQ6PCB8 327 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 DPF3Q92784 378 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 CYP4F11Q9HBI6 524 aa11.81□□□□□ -0.52
PTCH1-205ENST00000418258 NCOA4Q13772 614 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 DMC1Q14565 340 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 TEDDM1Q5T9Z0 273 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 MMS22LQ6ZRQ5 1243 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 USP33Q8TEY7 942 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 RAD18Q9NS91 495 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 CDHR2Q9BYE9 1310 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 PSMD3O43242 534 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 ACTR2P61160 394 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
PTCH1-205ENST00000418258 FAM84BQ96KN1 310 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-205ENST00000418258 TIPINQ9BVW5 301 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 MYOZ2Q9NPC6 264 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 POLR1AO95602 1720 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-205ENST00000418258 UBXN8O00124 270 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 SCP2P22307 547 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 SLC30A5Q8TAD4 765 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 CPA5Q8WXQ8 436 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 GPR63Q9BZJ6 419 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 PVALEFA0A1B0GWK0 134 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 RTN2O75298 545 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 GUCY2CP25092 1073 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 PTRHD1Q6GMV3 140 aaKnown RBP11.8□□□□□ -0.52
PTCH1-205ENST00000418258 C16orf87Q6PH81 154 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 SLC7A14Q8TBB6 771 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 HPS4Q9NQG7 708 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 SLC30A1Q9Y6M5 507 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 MAGOHP61326 146 aaKnown RBP11.8□□□□□ -0.52
PTCH1-205ENST00000418258 OCA2Q04671 838 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 FRMD5Q7Z6J6 570 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 TBC1D16Q8TBP0 767 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 ELMO2Q96JJ3 720 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 OSBPL9Q96SU4 736 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 ERAP1Q9NZ08 941 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 CCDC78A2IDD5 438 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 CD2BP2O95400 341 aaKnown RBP11.8□□□□□ -0.52
PTCH1-205ENST00000418258 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 GRIN1Q05586 938 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 DCAF6Q58WW2 860 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 XKR3Q5GH77 459 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 C10orf120Q5SQS8 335 aa11.8□□□□□ -0.52
PTCH1-205ENST00000418258 FAM32AQ9Y421 112 aaKnown RBP11.8□□□□□ -0.52
PTCH1-205ENST00000418258 PSMD14O00487 310 aa11.79□□□□□ -0.52
PTCH1-205ENST00000418258 EYA4O95677 639 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms