RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NCAPD2Q15021 1401 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 MAP3K5Q99683 1374 aa4.77□□□□□ -1.65
HMGB3P20-201ENST00000417997 MYPNQ86TC9 1320 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 N4BP2Q86UW6 1770 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 LCHNA4D1U4 455 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 FAM83GA6ND36 823 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 ELL2O00472 640 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 TGM5O43548 720 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 NARSO43776 548 aaKnown RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 RAB11FIP3O75154 756 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 CT47B1P0C2W7 299 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 POU3F2P20265 443 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 KIR2DL3P43628 341 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 SCNN1GP51170 649 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 ADAM8P78325 824 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 SMAD3P84022 425 aaKnown RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 OCRLQ01968 901 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 EXOSC9Q06265 439 aaKnown RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 LRRC32Q14392 662 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 NRAPQ86VF7 1730 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 ARHGEF25Q86VW2 580 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 TMPRSS6Q8IU80 811 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 TRMT2AQ8IZ69 625 aaKnown RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 SMC1BQ8NDV3 1235 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 LEO1Q8WVC0 666 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 NEU4Q8WWR8 484 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 TSR2Q969E8 191 aaKnown RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 MFSD3Q96ES6 412 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 ZNF496Q96IT1 587 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 CCDC136Q96JN2 1154 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 PHACTR3Q96KR7 559 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 ORAI3Q9BRQ5 295 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 GPR87Q9BY21 358 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 HAPLN2Q9GZV7 340 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 MS4A5Q9H3V2 200 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 SPTLC3Q9NUV7 552 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 PLAAQ9Y263 795 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 PCDHB6Q9Y5E3 794 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 CPDO75976 1380 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 KIAA0232Q92628 1395 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 LAMB4A4D0S4 1761 aa4.76□□□□□ -1.65
HMGB3P20-201ENST00000417997 SHANK3Q9BYB0 1731 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 NWD2Q9ULI1 1742 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 SUV39H1O43463 412 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 MFAP3LO75121 409 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 ADH4P08319 380 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 XPAP23025 273 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 LSP1P33241 339 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 MAN2A2P49641 1150 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 SEPT7Q16181 437 aaKnown RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 ZNF662Q6ZS27 426 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 CMTM4Q8IZR5 234 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 CDYL2Q8N8U2 506 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 ZNF483Q8TF39 744 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 ATXN2LQ8WWM7 1075 aaKnown RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 FRAT1Q92837 279 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 LRRC59Q96AG4 307 aaKnown RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 ZNF512Q96ME7 567 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 THUMPD2Q9BTF0 503 aaKnown RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 OSBPL6Q9BZF3 934 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 MMRN2Q9H8L6 949 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 PRDM11Q9NQV5 511 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 SMC4Q9NTJ3 1288 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 ING3Q9NXR8 418 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 ADAMTS7Q9UKP4 1686 aa4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 COL5A2P05997 1499 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P20-201ENST00000417997 CACNA1FO60840 1977 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 KIF16BQ96L93 1317 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 OVOS2A0A0G2JMS6 1433 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 MEGF6O75095 1541 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 A0A0A6YYK5 440 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 PLIN1O60240 522 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 FAM20BO75063 409 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 RPS6KA4O75676 772 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 STC2O76061 302 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 ALDH1A2O94788 518 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 IPO13O94829 963 aaKnown RBP4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 FKBP9O95302 570 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 GAAP10253 952 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 MYCLP1P12525 358 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 GNAT2P19087 354 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 ADCYAP1R1P41586 468 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 TGFB2P61812 414 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 PPARAQ07869 468 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 DCTN1Q14203 1278 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 MTHFSDQ2M296 383 aaKnown RBP4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 FAM214AQ32MH5 1076 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 AMOTQ4VCS5 1084 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 PLEKHO1Q53GL0 409 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 DALRD3Q5D0E6 543 aaKnown RBP4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 C1orf141Q5JVX7 400 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 ZBTB41Q5SVQ8 909 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 MFSD5Q6N075 450 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 ZNF530Q6P9A1 599 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 LMBR1LQ6UX01 489 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 FKBP9P1Q75LS8 142 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 MCM10Q7L590 875 aa4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 FTSJ3Q8IY81 847 aaKnown RBP4.74□□□□□ -1.65
HMGB3P20-201ENST00000417997 OR5M3Q8NGP4 307 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms