RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 SPATA31D4Q6ZUB0 917 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 RIN2Q8WYP3 895 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 PPP2R3CQ969Q6 453 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 CDCA3Q99618 268 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 BLZF1Q9H2G9 400 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 GOLPH3LQ9H4A5 285 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 C17orf75Q9HAS0 396 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 UBN1Q9NPG3 1134 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 PUF60Q9UHX1 559 aaKnown RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 MUTYHQ9UIF7 546 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 SF3B1O75533 1304 aaKnown RBP eCLIP11.17□□□□□ -0.621e-6■■■■■ 78.1
HDLBP-206ENST00000417540 SMIM28A0A1B0GU29 152 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 THP07101 528 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 IDEP14735 1019 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 KIAA0319Q5VV43 1072 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 RESP18Q5W5W9 173 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 ALKAL1Q6UXT8 129 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 ADHFE1Q8IWW8 467 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 EFCAB13Q8IY85 973 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 ST13P5Q8NFI4 369 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-206ENST00000417540 LEO1Q8WVC0 666 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-206ENST00000417540 RSPH1Q8WYR4 309 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 CASP10Q92851 521 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 SAAL1Q96ER3 474 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 ZNF396Q96N95 335 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-206ENST00000417540 CCDC94Q9BW85 323 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-206ENST00000417540 STRA6Q9BX79 667 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 LARSQ9P2J5 1176 aaKnown RBP11.17□□□□□ -0.62
HDLBP-206ENST00000417540 KANSL3Q9P2N6 904 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 CCDC39Q9UFE4 941 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 COL4A2P08572 1712 aa11.17□□□□□ -0.62
HDLBP-206ENST00000417540 PTPRJQ12913 1337 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 C2CD4DB7Z1M9 353 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 NRG2O14511 850 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-206ENST00000417540 ACTN4O43707 911 aaKnown RBP11.16□□□□□ -0.62
HDLBP-206ENST00000417540 CUTAO60888 179 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 PRPF6O94906 941 aaKnown RBP11.16□□□□□ -0.62
HDLBP-206ENST00000417540 GCNT3O95395 438 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 PFKFB1P16118 471 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 ADSSP30520 456 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 ME1P48163 572 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 ACOT2P49753 483 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 CDR1P51861 262 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 ASIC1P78348 528 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 GTF2BQ00403 316 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 PSMD5Q16401 504 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 UPP1Q16831 310 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 FAM171A1Q5VUB5 890 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 PDE12Q6L8Q7 609 aaKnown RBP11.16□□□□□ -0.62
HDLBP-206ENST00000417540 ZPBP2Q6X784 338 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 CCDC73Q6ZRK6 1079 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 GJD3Q8N144 294 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 FBXL18Q96ME1 805 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 CBWD1Q9BRT8 395 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 NTPCRQ9BSD7 190 aaKnown RBP11.16□□□□□ -0.62
HDLBP-206ENST00000417540 TCHPQ9BT92 498 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 MSTO1Q9BUK6 570 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 C1QTNF1Q9BXJ1 281 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 TRIM9Q9C026 710 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 MRPL17Q9NRX2 175 aaKnown RBP11.16□□□□□ -0.62
HDLBP-206ENST00000417540 CHST7Q9NS84 486 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 IRAK3Q9Y616 596 aa11.16□□□□□ -0.62
HDLBP-206ENST00000417540 PTPRDP23468 1912 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 GOLGA8IPA6NC78 632 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 GOLGA8JA6NMD2 632 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 LACTBL1A8MY62 500 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 POLR2DO15514 142 aaKnown RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 TGM5O43548 720 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 ALDH2P05091 517 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 KCNE1P15382 129 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 KLRC2P26717 231 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 HOXD13P35453 343 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 SMTNP53814 917 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 YARSP54577 528 aaKnown RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 CUL4BQ13620 913 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 CBX2Q14781 532 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 L1TD1Q5T7N2 865 aaKnown RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 LMBRD2Q68DH5 695 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 JADE1Q6IE81 842 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 TMEM184AQ6ZMB5 413 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 SV2BQ7L1I2 683 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 CEP57Q86XR8 500 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 PALB2Q86YC2 1186 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 KCNG4Q8TDN1 519 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 KCNN1Q92952 543 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 ZNF707Q96C28 371 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 KIF12Q96FN5 646 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 RPGRIP1Q96KN7 1286 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 ACAP3Q96P50 834 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 TNMDQ9H2S6 317 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 SFXN1Q9H9B4 322 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 MRPL44Q9H9J2 332 aaKnown RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 RXFP1Q9HBX9 757 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 SERTAD1Q9UHV2 236 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms