RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 WNT16Q9UBV4 365 aa23.91■■□□□ 1.42
ACTB-203ENST00000417101 I3L4J1 428 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 SLC16A4O15374 487 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 CCL16O15467 120 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 ATP2C1P98194 919 aaPredicted RBP23.9■■□□□ 1.42
ACTB-203ENST00000417101 SOX4Q06945 474 aaPredicted RBP23.9■■□□□ 1.42
ACTB-203ENST00000417101 RAD51AP2Q09MP3 1159 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 RAB33AQ14088 237 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 C3orf58Q8NDZ4 430 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 SLC7A14Q8TBB6 771 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 TMX3Q96JJ7 454 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 C17orf75Q9HAS0 396 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 MTRRQ9UBK8 725 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 POLIQ9UNA4 740 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 CFAP54Q96N23 3096 aa23.9■■□□□ 1.42
ACTB-203ENST00000417101 VWA8A3KMH1 1905 aa23.89■■□□□ 1.42
ACTB-203ENST00000417101 KRBA1A5PL33 1030 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 ANHXE9PGG2 379 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 STK25O00506 426 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 TRAPPC3O43617 180 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 SRFP11831 508 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 GUCY2CP25092 1073 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 TKTP29401 623 aaKnown RBP23.89■■□□□ 1.41
ACTB-203ENST00000417101 BRCC3P46736 316 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 HTR4Q13639 388 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 XKR4Q5GH76 650 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 AXDND1Q5T1B0 1012 aaPredicted RBP23.89■■□□□ 1.41
ACTB-203ENST00000417101 ALKAL1Q6UXT8 129 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 RSPO2Q6UXX9 243 aaPredicted RBP23.89■■□□□ 1.41
ACTB-203ENST00000417101 PLIN2Q99541 437 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 RTP3Q9BQQ7 232 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 CA14Q9ULX7 337 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 CDY1Q9Y6F8 540 aa23.89■■□□□ 1.41
ACTB-203ENST00000417101 H3BQV1 296 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 XYLBO75191 536 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 MCF2P10911 925 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 HARSP12081 509 aaKnown RBP23.88■■□□□ 1.41
ACTB-203ENST00000417101 PROZP22891 400 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 HOXA9P31269 272 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 MPZL3Q6UWV2 235 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 DDX27Q96GQ7 796 aaKnown RBP23.88■■□□□ 1.41
ACTB-203ENST00000417101 SNX27Q96L92 541 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 ZMAT2Q96NC0 199 aaKnown RBP23.88■■□□□ 1.41
ACTB-203ENST00000417101 ACAP3Q96P50 834 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 PNMA5Q96PV4 448 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 TIPINQ9BVW5 301 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 SLC38A7Q9NVC3 462 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 CDH7Q9ULB5 785 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 ZFP37Q9Y6Q3 630 aaPredicted RBP23.88■■□□□ 1.41
ACTB-203ENST00000417101 NUMBLQ9Y6R0 609 aa23.88■■□□□ 1.41
ACTB-203ENST00000417101 DMDP11532 3685 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 VWA3AA6NCI4 1184 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 ABLIM1O14639 778 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 CD2BP2O95400 341 aaKnown RBP23.87■■□□□ 1.41
ACTB-203ENST00000417101 RFX1P22670 979 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 GJB2P29033 226 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 HYIQ5T013 277 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 ANKS3Q6ZW76 656 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 GPR152Q8TDT2 470 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 ZBTB45Q96K62 511 aaPredicted RBP23.87■■□□□ 1.41
ACTB-203ENST00000417101 NTPCRQ9BSD7 190 aaKnown RBP23.87■■□□□ 1.41
ACTB-203ENST00000417101 BACE2Q9Y5Z0 518 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 DOCK6Q96HP0 2047 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 TRIP11Q15643 1979 aa23.87■■□□□ 1.41
ACTB-203ENST00000417101 PODXLO00592 558 aa23.86■■□□□ 1.41
ACTB-203ENST00000417101 STRN3Q13033 797 aa23.86■■□□□ 1.41
ACTB-203ENST00000417101 UVSSAQ2YD98 709 aa23.86■■□□□ 1.41
ACTB-203ENST00000417101 CCDC105Q8IYK2 499 aa23.86■■□□□ 1.41
ACTB-203ENST00000417101 SYT2Q8N9I0 419 aaPredicted RBP23.86■■□□□ 1.41
ACTB-203ENST00000417101 SPIRE2Q8WWL2 714 aa23.86■■□□□ 1.41
ACTB-203ENST00000417101 CDK5RAP3Q96JB5 506 aa23.86■■□□□ 1.41
ACTB-203ENST00000417101 PROB1E7EW31 1015 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 PLS3P13797 630 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 KCNE1P15382 129 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 NBL1P41271 181 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 SMTNP53814 917 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 PARM1Q6UWI2 310 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 DTWD2Q8NBA8 298 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 TMEM161BQ8NDZ6 487 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 ITFG1Q8TB96 612 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 FGF13Q92913 245 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 FGF14Q92915 247 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 C18orf25Q96B23 403 aaPredicted RBP23.85■■□□□ 1.41
ACTB-203ENST00000417101 RPP25Q9BUL9 199 aaKnown RBP23.85■■□□□ 1.41
ACTB-203ENST00000417101 TBC1D17Q9HA65 648 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 HCFC1R1Q9NWW0 138 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 CNTN3Q9P232 1028 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 ANKFY1Q9P2R3 1169 aa23.85■■□□□ 1.41
ACTB-203ENST00000417101 MEFVO15553 781 aaPredicted RBP23.84■■□□□ 1.41
ACTB-203ENST00000417101 POU2F2P09086 479 aa23.84■■□□□ 1.41
ACTB-203ENST00000417101 PLA2G4BP0C869 781 aa23.84■■□□□ 1.41
ACTB-203ENST00000417101 SLC12A3P55017 1021 aa23.84■■□□□ 1.41
ACTB-203ENST00000417101 SEZ6Q53EL9 994 aa23.84■■□□□ 1.41
ACTB-203ENST00000417101 KCTD17Q8N5Z5 321 aa23.84■■□□□ 1.41
ACTB-203ENST00000417101 KCNG1Q9UIX4 513 aa23.84■■□□□ 1.41
ACTB-203ENST00000417101 PTPRZ1P23471 2315 aaPredicted RBP23.84■■□□□ 1.41
ACTB-203ENST00000417101 NPHP3-ACAD11A0A0J9YXS1 232 aa23.83■■□□□ 1.41
ACTB-203ENST00000417101 TOM1L1O75674 476 aa23.83■■□□□ 1.41
ACTB-203ENST00000417101 MAPTP10636 758 aaKnown RBP23.83■■□□□ 1.41
ACTB-203ENST00000417101 NOLC1Q14978 699 aaKnown RBP eCLIP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms