RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 STRN3Q13033 797 aa12.46□□□□□ -0.41
SNX30-202ENST00000416585 RAB33AQ14088 237 aa12.46□□□□□ -0.41
SNX30-202ENST00000416585 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.41
SNX30-202ENST00000416585 RTL10Q7L3V2 364 aa12.46□□□□□ -0.41
SNX30-202ENST00000416585 DDX27Q96GQ7 796 aaKnown RBP12.46□□□□□ -0.41
SNX30-202ENST00000416585 MTRRQ9UBK8 725 aa12.46□□□□□ -0.41
SNX30-202ENST00000416585 TNFSF13BQ9Y275 285 aa12.46□□□□□ -0.41
SNX30-202ENST00000416585 USP20Q9Y2K6 914 aa12.46□□□□□ -0.41
SNX30-202ENST00000416585 NUB1Q9Y5A7 615 aa12.46□□□□□ -0.41
SNX30-202ENST00000416585 RALGAPA1Q6GYQ0 2036 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 NUP210Q8TEM1 1887 aaPredicted RBP12.45□□□□□ -0.42
SNX30-202ENST00000416585 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
SNX30-202ENST00000416585 HARSP12081 509 aaKnown RBP12.45□□□□□ -0.42
SNX30-202ENST00000416585 FGFR3P22607 806 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 GRM5P41594 1212 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 MATR3P43243 847 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNX30-202ENST00000416585 NTHL1P78549 312 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 FOXK2Q01167 660 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 PTGDRQ13258 359 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 PDIA5Q14554 519 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
SNX30-202ENST00000416585 ELMOD1Q8N336 334 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 ST13P5Q8NFI4 369 aaPredicted RBP12.45□□□□□ -0.42
SNX30-202ENST00000416585 FGF13Q92913 245 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 FGF14Q92915 247 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 CDK5RAP3Q96JB5 506 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 SNX27Q96L92 541 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 ACAP3Q96P50 834 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 PPP1R10Q96QC0 940 aaKnown RBP12.45□□□□□ -0.42
SNX30-202ENST00000416585 BCO2Q9BYV7 579 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 TMEM134Q9H6X4 195 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 POLD4Q9HCU8 107 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 KCNG1Q9UIX4 513 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 KCNH3Q9ULD8 1083 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 MRPS23Q9Y3D9 190 aaKnown RBP12.45□□□□□ -0.42
SNX30-202ENST00000416585 RBM19Q9Y4C8 960 aaKnown RBP12.45□□□□□ -0.42
SNX30-202ENST00000416585 FAM186AA6NE01 2351 aa12.45□□□□□ -0.42
SNX30-202ENST00000416585 KIF26AQ9ULI4 1882 aaPredicted RBP12.44□□□□□ -0.42
SNX30-202ENST00000416585 H7C4K7 107 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 HIP1RO75146 1068 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 LMNAP02545 664 aaKnown RBP12.44□□□□□ -0.42
SNX30-202ENST00000416585 EDN1P05305 212 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 POU2F2P09086 479 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 TKTP29401 623 aaKnown RBP12.44□□□□□ -0.42
SNX30-202ENST00000416585 SMTNP53814 917 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 ARPP19P56211 112 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 GPC5P78333 572 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 PRKCQQ04759 706 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 NBR1Q14596 966 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 UBXN2BQ14CS0 331 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 NAB2Q15742 525 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 MLF2Q15773 248 aaPredicted RBP12.44□□□□□ -0.42
SNX30-202ENST00000416585 UPP1Q16831 310 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 NT5DC1Q5TFE4 455 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 MCTP1Q6DN14 999 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 PARM1Q6UWI2 310 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 DTHD1Q6ZMT9 781 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 PJA1Q8NG27 643 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 TIPINQ9BVW5 301 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 CDT1Q9H211 546 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 C17orf75Q9HAS0 396 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 GOLGA2P5Q9HBQ8 144 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 BACE2Q9Y5Z0 518 aa12.44□□□□□ -0.42
SNX30-202ENST00000416585 CACNA1IQ9P0X4 2223 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 SMIM28A0A1B0GU29 152 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 KANSL1LA0AUZ9 987 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 E9PMD0 336 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 I3L4J1 428 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 PODXLO00592 558 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 NCAM2O15394 837 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 ADAM12O43184 909 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 MCF2P10911 925 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 PTPN2P17706 415 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 MCM4P33991 863 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 BRCC3P46736 316 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 ID4P47928 161 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 NPTX2P47972 431 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 SNW1Q13573 536 aaKnown RBP12.43□□□□□ -0.42
SNX30-202ENST00000416585 MPZL3Q6UWV2 235 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 C1orf210Q8IVY1 113 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 ITFG1Q8TB96 612 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 ACO2Q99798 780 aaKnown RBP12.43□□□□□ -0.42
SNX30-202ENST00000416585 KXD1Q9BQD3 176 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 FOXQ1Q9C009 403 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 CXCL16Q9H2A7 254 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 SPATA6Q9NWH7 488 aaPredicted RBP12.43□□□□□ -0.42
SNX30-202ENST00000416585 HCFC1R1Q9NWW0 138 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 ANKFY1Q9P2R3 1169 aa12.43□□□□□ -0.42
SNX30-202ENST00000416585 PTPRZ1P23471 2315 aaPredicted RBP12.42□□□□□ -0.42
SNX30-202ENST00000416585 ZNF197O14709 1029 aa12.42□□□□□ -0.42
SNX30-202ENST00000416585 SYN3O14994 580 aa12.42□□□□□ -0.42
SNX30-202ENST00000416585 SLC16A4O15374 487 aa12.42□□□□□ -0.42
SNX30-202ENST00000416585 LAMTOR5O43504 91 aa12.42□□□□□ -0.42
SNX30-202ENST00000416585 RHOP08100 348 aa12.42□□□□□ -0.42
SNX30-202ENST00000416585 MARCKSP29966 332 aaPredicted RBP12.42□□□□□ -0.42
SNX30-202ENST00000416585 RPL9P32969 192 aaKnown RBP12.42□□□□□ -0.42
SNX30-202ENST00000416585 PRPHP41219 470 aa12.42□□□□□ -0.42
SNX30-202ENST00000416585 MAGEA9P43362 315 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms