RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 SV2AQ7L0J3 742 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 CACNA2D4Q7Z3S7 1137 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 UBE2Q1Q7Z7E8 422 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 MRPL10Q7Z7H8 261 aaKnown RBP9.08□□□□□ -0.96
RBM39-208ENST00000416108 ECHDC2Q86YB7 292 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 TMEM192Q8IY95 271 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 ABI1Q8IZP0 508 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 TNS4Q8IZW8 715 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 SMG8Q8ND04 991 aaKnown RBP9.08□□□□□ -0.96
RBM39-208ENST00000416108 FBXL13Q8NEE6 735 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 BEST2Q8NFU1 509 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 URGCPQ8TCY9 931 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 PLEKHO2Q8TD55 490 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 DPF3Q92784 378 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 POP1Q99575 1024 aaKnown RBP9.08□□□□□ -0.96
RBM39-208ENST00000416108 CRACR2AQ9BSW2 395 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 OSBPL7Q9BZF2 842 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 MTMR12Q9C0I1 747 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 TMEM117Q9H0C3 514 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 TSPYL2Q9H2G4 693 aaPredicted RBP9.08□□□□□ -0.96
RBM39-208ENST00000416108 RSAD1Q9HA92 442 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 SLC38A7Q9NVC3 462 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 INTS13Q9NVM9 706 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 KLK14Q9P0G3 267 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 IMPACTQ9P2X3 320 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 UBQLN1Q9UMX0 589 aaKnown RBP9.08□□□□□ -0.96
RBM39-208ENST00000416108 C2CD2Q9Y426 696 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 PCDHB7Q9Y5E2 793 aa9.08□□□□□ -0.96
RBM39-208ENST00000416108 TRIM43BA6NCK2 446 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 C9IYK1 514 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 PMM2O15305 246 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 HOXA2O43364 376 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 NRDCO43847 1150 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 EOMESO95936 686 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 NFICP08651 508 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 MLH1P40692 756 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 GSDMDP57764 484 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 CLDN10P78369 228 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 FPGSQ05932 587 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 TSR1Q2NL82 804 aaKnown RBP9.07□□□□□ -0.96
RBM39-208ENST00000416108 ZACNQ401N2 412 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 CBWD6Q4V339 395 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 CBWD3Q5JTY5 395 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 GLRA4Q5JXX5 417 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 CBWD5Q5RIA9 395 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 GLB1LQ6UWU2 654 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 EFCAB13Q8IY85 973 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 ZNF397Q8NF99 534 aaPredicted RBP9.07□□□□□ -0.96
RBM39-208ENST00000416108 LPPQ93052 612 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 TRIM43Q96BQ3 446 aaPredicted RBP9.07□□□□□ -0.96
RBM39-208ENST00000416108 FAM81BQ96LP2 452 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 NT5C1BQ96P26 610 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 LBHD1Q9BQE6 289 aaPredicted RBP9.07□□□□□ -0.96
RBM39-208ENST00000416108 INTS2Q9H0H0 1204 aaKnown RBP9.07□□□□□ -0.96
RBM39-208ENST00000416108 ELAC1Q9H777 363 aaKnown RBP9.07□□□□□ -0.96
RBM39-208ENST00000416108 FAM207AQ9NSI2 230 aaPredicted RBP9.07□□□□□ -0.96
RBM39-208ENST00000416108 RAB20Q9NX57 234 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 TMEM161AQ9NX61 479 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 CNTN3Q9P232 1028 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 INPP5FQ9Y2H2 1132 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 DAAM1Q9Y4D1 1078 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 PCNTO95613 3336 aa9.07□□□□□ -0.96
RBM39-208ENST00000416108 NLRC5Q86WI3 1866 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 KIAA1671Q9BY89 1806 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 ABHD14A-ACY1A0A1B0GW23 586 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 ENPP3O14638 875 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 ZC3H11AO75152 810 aaKnown RBP eCLIP9.06□□□□□ -0.96
RBM39-208ENST00000416108 HLA-DRAP01903 254 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 AMHP03971 560 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 C4BPAP04003 597 aaKnown RBP9.06□□□□□ -0.96
RBM39-208ENST00000416108 ITGB3P05106 788 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 THP07101 528 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 CSF2RAP15509 400 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 ATF7P17544 494 aaPredicted RBP9.06□□□□□ -0.96
RBM39-208ENST00000416108 RFX1P22670 979 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 PON1P27169 355 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 PBX1P40424 430 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 KCNJ6P48051 423 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 WNT7BP56706 349 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 MCCD1P59942 119 aaPredicted RBP9.06□□□□□ -0.96
RBM39-208ENST00000416108 RBP5P82980 135 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 LRMPQ12912 555 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 NCOA4Q13772 614 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 PTPN21Q16825 1174 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 EPC2Q52LR7 807 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 C1orf220Q5T0J3 134 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 TDRD10Q5VZ19 366 aaKnown RBP9.06□□□□□ -0.96
RBM39-208ENST00000416108 PSRC1Q6PGN9 363 aaPredicted RBP9.06□□□□□ -0.96
RBM39-208ENST00000416108 TRAPPC11Q7Z392 1133 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 CNGA4Q8IV77 575 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 EHBP1Q8NDI1 1231 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 OR5B17Q8NGF7 314 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 CPLX3Q8WVH0 158 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 RSPH1Q8WYR4 309 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 ZNF560Q96MR9 790 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 FAM193BQ96PV7 902 aaPredicted RBP9.06□□□□□ -0.96
RBM39-208ENST00000416108 SPAG5Q96R06 1193 aa9.06□□□□□ -0.96
RBM39-208ENST00000416108 GAD1Q99259 594 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms