RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 NHEJ1Q9H9Q4 299 aaPredicted RBP23.13■■□□□ 1.29
CEACAM3-203ENST00000415495 F8VZ95 297 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 CAND2O75155 1236 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 RPS6KA5O75582 802 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 CST3P01034 146 aaPredicted RBP23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 BIRC3Q13489 604 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 FBXO47Q5MNV8 452 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 FBXO46Q6PJ61 603 aaPredicted RBP23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 TRAF7Q6Q0C0 670 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 CCDC170Q8IYT3 715 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 KAT5Q92993 513 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 KREMEN1Q96MU8 473 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 PI4K2AQ9BTU6 479 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 CCDC94Q9BW85 323 aaPredicted RBP23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 MTMR12Q9C0I1 747 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 CRISPLD2Q9H0B8 497 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 ADGRG1Q9Y653 693 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 EPN1Q9Y6I3 576 aaPredicted RBP23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 CEP350Q5VT06 3117 aa23.12■■□□□ 1.29
CEACAM3-203ENST00000415495 SERPING1P05155 500 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 STAT1P42224 750 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 MAPK8IP2Q13387 824 aaPredicted RBP23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 ASTE1Q2TB18 679 aaPredicted RBP23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 ZNF618Q5T7W0 954 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 ELMO3Q96BJ8 720 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 ZNF333Q96JL9 665 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 NT5C1BQ96P26 610 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 ERVK-5Q9HDB9 667 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 TRMT1Q9NXH9 659 aaKnown RBP23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 SNTG2Q9NY99 539 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 FOXN3O00409 490 aaPredicted RBP23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 NDUFA10O95299 355 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 NFICP08651 508 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 PNMA6AP0CW24 399 aaPredicted RBP23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 SOX5P35711 763 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 PRKCIP41743 596 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 PIK3CAP42336 1068 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 MNX1P50219 401 aaPredicted RBP23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 TFAMQ00059 246 aaKnown RBP23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 ASIC2Q16515 512 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 JADE1Q6IE81 842 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 ALKAL1Q6UXT8 129 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 CD302Q8IX05 232 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 DESI2Q9BSY9 194 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 PLEKHA5Q9HAU0 1116 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 PPP2R2CQ9Y2T4 447 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 HES2Q9Y543 173 aa23.11■■□□□ 1.29
CEACAM3-203ENST00000415495 SSU72P8A0A1W2PR75 194 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 GPR182O15218 404 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 CKBP12277 381 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 EIF4A3P38919 411 aaKnown RBP23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 NCOA4Q13772 614 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 LPIN1Q14693 890 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 ARHGAP44Q17R89 818 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 REXO1L1PQ8IX06 675 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 CXorf38Q8TB03 319 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 ARMC5Q96C12 935 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 CXCL16Q9H2A7 254 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 NXF3Q9H4D5 531 aaKnown RBP23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 APOBEC3GQ9HC16 384 aaKnown RBP23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 CHST12Q9NRB3 414 aa23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 REXO2Q9Y3B8 237 aaKnown RBP23.1■■□□□ 1.29
CEACAM3-203ENST00000415495 PHACTR2O75167 634 aa23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 LBX1P52954 281 aa23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 NFX1Q12986 1120 aaKnown RBP23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 FAM126BQ8IXS8 530 aa23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 PPM1KQ8N3J5 372 aa23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 SMG8Q8ND04 991 aaKnown RBP23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 ANKRD36BP1Q96IX9 119 aa23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 SQORQ9Y6N5 450 aa23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 DNAH12Q6ZR08 3092 aa23.09■■□□□ 1.29
CEACAM3-203ENST00000415495 EIF3CLB5ME19 914 aaKnown RBP23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 SGPL1O95470 568 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 CD4P01730 458 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 TNNC2P02585 160 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 TMEM191BP0C7N4 346 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 MFAP3P55082 362 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 GCNT1Q02742 428 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 ARID5AQ03989 594 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 KLHL30Q0D2K2 578 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 WDR44Q5JSH3 913 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 SHC3Q92529 594 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 PPP1R13BQ96KQ4 1090 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 SNX27Q96L92 541 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 CCDC42Q96M95 316 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 EIF3CQ99613 913 aaKnown RBP23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 TRIM6Q9C030 488 aaPredicted RBP23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 SIX4Q9UIU6 781 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 PADI3Q9ULW8 664 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 C2CD2Q9Y426 696 aa23.08■■□□□ 1.29
CEACAM3-203ENST00000415495 GFPT2O94808 682 aa23.08■■□□□ 1.28
CEACAM3-203ENST00000415495 ASS1P00966 412 aaKnown RBP23.08■■□□□ 1.28
CEACAM3-203ENST00000415495 GHRP10912 638 aa23.08■■□□□ 1.28
CEACAM3-203ENST00000415495 FERP16591 822 aa23.08■■□□□ 1.28
CEACAM3-203ENST00000415495 CD52P31358 61 aa23.08■■□□□ 1.28
CEACAM3-203ENST00000415495 CYLC1P35663 651 aaPredicted RBP23.08■■□□□ 1.28
CEACAM3-203ENST00000415495 MYL6P60660 151 aa23.08■■□□□ 1.28
CEACAM3-203ENST00000415495 PKN2Q16513 984 aaKnown RBP23.08■■□□□ 1.28
CEACAM3-203ENST00000415495 XKR4Q5GH76 650 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms