RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 EXOC3L4Q17RC7 722 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 EPC2Q52LR7 807 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 FIGNQ5HY92 759 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 TDRD10Q5VZ19 366 aaKnown RBP15.41■□□□□ 0.06
SF3B1-204ENST00000414963 JADE1Q6IE81 842 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 DPY19L2P1Q6NXN4 242 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 DEFB128Q7Z7B8 93 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 LMO3Q8TAP4 145 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 IQCDQ96DY2 449 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 PLCB1Q9NQ66 1216 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 TMEM161AQ9NX61 479 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 PRKAG2Q9UGJ0 569 aa15.41■□□□□ 0.06
SF3B1-204ENST00000414963 SMIM28A0A1B0GU29 152 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 EFCAB14O75071 495 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 TNNC2P02585 160 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 NFICP08651 508 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 CYP3A5P20815 502 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 PON1P27169 355 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 TBX2Q13207 712 aaPredicted RBP15.4■□□□□ 0.06
SF3B1-204ENST00000414963 TRAPPC11Q7Z392 1133 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 GSTCDQ8NEC7 633 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 FBXL13Q8NEE6 735 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 RSPH1Q8WYR4 309 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 ANKRD36BP1Q96IX9 119 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 ZMAT2Q96NC0 199 aaKnown RBP15.4■□□□□ 0.06
SF3B1-204ENST00000414963 PPP1R9BQ96SB3 815 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 NUP58Q9BVL2 599 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 APOL6Q9BWW8 343 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 CXCL16Q9H2A7 254 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 IL23AQ9NPF7 189 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 RAB20Q9NX57 234 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 IMPACTQ9P2X3 320 aa15.4■□□□□ 0.06
SF3B1-204ENST00000414963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.4■□□□□ 0.067e-10■□□□□ 9.8
SF3B1-204ENST00000414963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.39■□□□□ 0.05
SF3B1-204ENST00000414963 ARL5CA6NH57 179 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 CCDC85CA6NKD9 419 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 MEIS3P2A8K0S8 358 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 PTGESO14684 152 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 EVI5O60447 810 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 ZC3H11AO75152 810 aaKnown RBP eCLIP15.39■□□□□ 0.05
SF3B1-204ENST00000414963 OFD1O75665 1012 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 VNN1O95497 513 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 TMEM191BP0C7N4 346 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 TFAMQ00059 246 aaKnown RBP15.39■□□□□ 0.05
SF3B1-204ENST00000414963 PPIGQ13427 754 aaKnown RBP eCLIP15.39■□□□□ 0.055e-11■□□□□ 10.3
SF3B1-204ENST00000414963 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
SF3B1-204ENST00000414963 CXorf38Q8TB03 319 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 TAS1R2Q8TE23 839 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 LPPQ93052 612 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 KIF12Q96FN5 646 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 PPP1R10Q96QC0 940 aaKnown RBP15.39■□□□□ 0.05
SF3B1-204ENST00000414963 GAD1Q99259 594 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 CRACR2AQ9BSW2 395 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 EDEM3Q9BZQ6 932 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 MTMR12Q9C0I1 747 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 INTS2Q9H0H0 1204 aaKnown RBP15.39■□□□□ 0.05
SF3B1-204ENST00000414963 MMRN2Q9H8L6 949 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 RSAD1Q9HA92 442 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 KLK14Q9P0G3 267 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 GCNT4Q9P109 453 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 FBXL5Q9UKA1 691 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 ITGA11Q9UKX5 1188 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 UBQLN1Q9UMX0 589 aaKnown RBP15.39■□□□□ 0.05
SF3B1-204ENST00000414963 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
SF3B1-204ENST00000414963 XPOTO43592 962 aaKnown RBP15.38■□□□□ 0.05
SF3B1-204ENST00000414963 BAIAP3O94812 1187 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 NOL4O94818 638 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 HLA-DRAP01903 254 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 SLC9A1P19634 815 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 MLH1P40692 756 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 CCDC173Q0VFZ6 552 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 NCOA4Q13772 614 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 TRIM14Q14142 442 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 PTPN21Q16825 1174 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 SMYD5Q6GMV2 418 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 TRIM65Q6PJ69 517 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 TMC6Q7Z403 805 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 NPAS4Q8IUM7 802 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 C7orf61Q8IZ16 206 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 TNS4Q8IZW8 715 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 C1orf127Q8N9H9 656 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 BEST2Q8NFU1 509 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 SEMA4DQ92854 862 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 ZFP42Q96MM3 310 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 TTYH3Q9C0H2 523 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 SIX2Q9NPC8 291 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 SLC38A7Q9NVC3 462 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 DPP3Q9NY33 737 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 PCDHB7Q9Y5E2 793 aa15.38■□□□□ 0.05
SF3B1-204ENST00000414963 ALPK3Q96L96 1907 aa15.37■□□□□ 0.05
SF3B1-204ENST00000414963 TET1Q8NFU7 2136 aa15.37■□□□□ 0.05
SF3B1-204ENST00000414963 A0A1W2PQJ5 194 aa15.37■□□□□ 0.05
SF3B1-204ENST00000414963 HOXA2O43364 376 aa15.37■□□□□ 0.05
SF3B1-204ENST00000414963 PHACTR2O75167 634 aa15.37■□□□□ 0.05
SF3B1-204ENST00000414963 STAU1O95793 577 aaKnown RBP15.37■□□□□ 0.05
SF3B1-204ENST00000414963 CST3P01034 146 aaPredicted RBP15.37■□□□□ 0.05
SF3B1-204ENST00000414963 KLK7P49862 253 aa15.37■□□□□ 0.05
SF3B1-204ENST00000414963 FPGSQ05932 587 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms