RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 CBWD2Q8IUF1 395 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 RNF169Q8NCN4 708 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 FBXL18Q96ME1 805 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.13■□□□□ 0.816e-8■■□□□ 11.6
CIRBP-202ENST00000413636 CCDC94Q9BW85 323 aaPredicted RBP20.13■□□□□ 0.81
CIRBP-202ENST00000413636 ZNHIT6Q9NWK9 470 aaKnown RBP20.13■□□□□ 0.81
CIRBP-202ENST00000413636 CITO14578 2027 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 TTC3P53804 2025 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 AKAP3O75969 853 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 SKIP12755 728 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 ATF7P17544 494 aaPredicted RBP20.13■□□□□ 0.81
CIRBP-202ENST00000413636 AKAP5P24588 427 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 MAGEA10P43363 369 aaPredicted RBP20.13■□□□□ 0.81
CIRBP-202ENST00000413636 PTPN14Q15678 1187 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 SNRNP35Q16560 246 aaKnown RBP20.13■□□□□ 0.81
CIRBP-202ENST00000413636 TMEM240Q5SV17 173 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 PSRC1Q6PGN9 363 aaPredicted RBP20.13■□□□□ 0.81
CIRBP-202ENST00000413636 MRPL10Q7Z7H8 261 aaKnown RBP20.13■□□□□ 0.81
CIRBP-202ENST00000413636 LPPQ93052 612 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 ACAP3Q96P50 834 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 KIAA1586Q9HCI6 787 aa20.13■□□□□ 0.81
CIRBP-202ENST00000413636 CPSF3Q9UKF6 684 aaKnown RBP20.13■□□□□ 0.81
CIRBP-202ENST00000413636 MEIS3P2A8K0S8 358 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 BAIAP3O94812 1187 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
CIRBP-202ENST00000413636 ADRB2P07550 413 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 CLTAP09496 248 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 ITGA4P13612 1032 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 KCNH2Q12809 1159 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 KYAT1Q16773 422 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 ZNF598Q86UK7 904 aaKnown RBP20.12■□□□□ 0.81
CIRBP-202ENST00000413636 HACE1Q8IYU2 909 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 NEK11Q8NG66 645 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 MMRN2Q9H8L6 949 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 PARP2Q9UGN5 583 aa20.12■□□□□ 0.81
CIRBP-202ENST00000413636 ZNF233A6NK53 670 aa20.11■□□□□ 0.81
CIRBP-202ENST00000413636 EFCAB14O75071 495 aa20.11■□□□□ 0.81
CIRBP-202ENST00000413636 RECQL4O94761 1208 aa20.11■□□□□ 0.81
CIRBP-202ENST00000413636 CXCL8P10145 99 aa20.11■□□□□ 0.81
CIRBP-202ENST00000413636 WDR5P61964 334 aaKnown RBP20.11■□□□□ 0.81
CIRBP-202ENST00000413636 ENOX2Q16206 610 aaKnown RBP20.11■□□□□ 0.81
CIRBP-202ENST00000413636 FAM186BQ8IYM0 893 aa20.11■□□□□ 0.81
CIRBP-202ENST00000413636 PGBD4Q96DM1 585 aa20.11■□□□□ 0.81
CIRBP-202ENST00000413636 NUCKS1Q9H1E3 243 aaKnown RBP20.11■□□□□ 0.81
CIRBP-202ENST00000413636 RPF1Q9H9Y2 349 aaKnown RBP20.11■□□□□ 0.81
CIRBP-202ENST00000413636 TRMT1Q9NXH9 659 aaKnown RBP20.11■□□□□ 0.81
CIRBP-202ENST00000413636 RBAKQ9NYW8 714 aaPredicted RBP20.11■□□□□ 0.81
CIRBP-202ENST00000413636 ANK1P16157 1881 aa20.11■□□□□ 0.81
CIRBP-202ENST00000413636 TRIP11Q15643 1979 aa20.11■□□□□ 0.81
CIRBP-202ENST00000413636 ZBBXA8MT70 800 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 H0YGN5 161 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 TULP1O00294 542 aaPredicted RBP20.1■□□□□ 0.81
CIRBP-202ENST00000413636 MAPK13O15264 365 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 MEFVO15553 781 aaPredicted RBP20.1■□□□□ 0.81
CIRBP-202ENST00000413636 EOMESO95936 686 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 YARSP54577 528 aaKnown RBP20.1■□□□□ 0.81
CIRBP-202ENST00000413636 HSP90AA2PQ14568 343 aaPredicted RBP20.1■□□□□ 0.81
CIRBP-202ENST00000413636 AGMOQ6ZNB7 445 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 NYAP1Q6ZVC0 841 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 PPP1R13BQ96KQ4 1090 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 TMEM161AQ9NX61 479 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 PPP2R2CQ9Y2T4 447 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 PCDHB7Q9Y5E2 793 aa20.1■□□□□ 0.81
CIRBP-202ENST00000413636 GTPBP10A4D1E9 387 aaKnown RBP20.09■□□□□ 0.81
CIRBP-202ENST00000413636 RNF225M0QZC1 329 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-202ENST00000413636 CCDC175P0C221 793 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 TNNT1P13805 278 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 DEFB103AP81534 67 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 CDK17Q00537 523 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 CYP24A1Q07973 514 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 SLC10A6Q3KNW5 377 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 BRSK2Q8IWQ3 736 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 FAM212AQ96EL1 285 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 BORCS6Q96GS4 357 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 C16orf45Q96MC5 204 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-202ENST00000413636 ELAC1Q9H777 363 aaKnown RBP20.09■□□□□ 0.81
CIRBP-202ENST00000413636 KLK14Q9P0G3 267 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 LRFN2Q9ULH4 789 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 RALGAPA2Q2PPJ7 1873 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 USP27XA6NNY8 438 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 AMHP03971 560 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 KLK7P49862 253 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 WNT7BP56706 349 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 MEA1Q16626 185 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 NPAS4Q8IUM7 802 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 HERVK_113Q902F9 699 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 MFSD14AQ96MC6 490 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 TOPORSQ9NS56 1045 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-202ENST00000413636 PTPRSQ13332 1948 aa20.09■□□□□ 0.81
CIRBP-202ENST00000413636 UPP2O95045 317 aa20.08■□□□□ 0.8
CIRBP-202ENST00000413636 HNRNPH3P31942 346 aaKnown RBP20.08■□□□□ 0.8
CIRBP-202ENST00000413636 TERF1P54274 439 aa20.08■□□□□ 0.8
CIRBP-202ENST00000413636 KCNMA1Q12791 1236 aa20.08■□□□□ 0.8
CIRBP-202ENST00000413636 CRIPAKQ8N1N5 446 aa20.08■□□□□ 0.8
CIRBP-202ENST00000413636 SNX27Q96L92 541 aa20.08■□□□□ 0.8
CIRBP-202ENST00000413636 CXCL16Q9H2A7 254 aa20.08■□□□□ 0.8
CIRBP-202ENST00000413636 RSAD1Q9HA92 442 aa20.08■□□□□ 0.8
CIRBP-202ENST00000413636 PDE11AQ9HCR9 933 aa20.08■□□□□ 0.8
CIRBP-202ENST00000413636 FAM207AQ9NSI2 230 aaPredicted RBP20.08■□□□□ 0.8
CIRBP-202ENST00000413636 CXXC1Q9P0U4 656 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms