RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PCDHGA2Q9Y5H1 932 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 FAM170BA6NMN3 283 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 LAMTOR5O43504 91 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 LILRB5O75023 590 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 LARGE1O95461 756 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 CYP11B2P19099 503 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 ATP2B1P20020 1258 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 CD72P21854 359 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
LIMS2-210ENST00000413578 TKTP29401 623 aaKnown RBP13.41□□□□□ -0.26
LIMS2-210ENST00000413578 RPS9P46781 194 aaKnown RBP13.41□□□□□ -0.26
LIMS2-210ENST00000413578 UBXN2BQ14CS0 331 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 UPP1Q16831 310 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 DCAF4L1Q3SXM0 396 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 XKR4Q5GH76 650 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 SLC8B1Q6J4K2 584 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 C3orf58Q8NDZ4 430 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 NACC1Q96RE7 527 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 PLA2G2FQ9BZM2 168 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 PRMT8Q9NR22 394 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-210ENST00000413578 SPATA6Q9NWH7 488 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-210ENST00000413578 GDE1Q9NZC3 331 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 CDY1Q9Y6F8 540 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 VWA8A3KMH1 1905 aa13.41□□□□□ -0.26
LIMS2-210ENST00000413578 TPRP12270 2363 aaKnown RBP13.4□□□□□ -0.26
LIMS2-210ENST00000413578 NOTCH4Q99466 2003 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 TBC1D4O60343 1298 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 B3GAT3O94766 335 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 RHOP08100 348 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 TGM1P22735 817 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 FCARP24071 287 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 RPA1P27694 616 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 CLCNKBP51801 687 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 ANAPC15P60006 121 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 GLRA4Q5JXX5 417 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 VARS2Q5ST30 1063 aaKnown RBP13.4□□□□□ -0.26
LIMS2-210ENST00000413578 NT5DC1Q5TFE4 455 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 PADI6Q6TGC4 694 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 ALKAL1Q6UXT8 129 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 NECAB1Q8N987 351 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 ING5Q8WYH8 240 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 UROC1Q96N76 676 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 ADPGKQ9BRR6 497 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 KIFC3Q9BVG8 833 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 EPC1Q9H2F5 836 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 GDAQ9Y2T3 454 aa13.4□□□□□ -0.26
LIMS2-210ENST00000413578 MRPS23Q9Y3D9 190 aaKnown RBP13.4□□□□□ -0.26
LIMS2-210ENST00000413578 SPTBN2O15020 2390 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 MYH15Q9Y2K3 1946 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 NRG2O14511 850 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-210ENST00000413578 JAK2O60674 1132 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 ABLIM3O94929 683 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 TDGF1P13385 188 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 BRCC3P46736 316 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 ROR1Q01973 937 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 CSTF1Q05048 431 aaKnown RBP13.39□□□□□ -0.27
LIMS2-210ENST00000413578 SOX4Q06945 474 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-210ENST00000413578 ST3GAL1Q11201 340 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 ECM1Q16610 540 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 PRSS36Q5K4E3 855 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 TPRG1Q6ZUI0 275 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 ANKS3Q6ZW76 656 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 DEPTORQ8TB45 409 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 DNASE1L2Q92874 299 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 NELL2Q99435 816 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 GOLGA2P5Q9HBQ8 144 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 ZSCAN32Q9NX65 697 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 TNFSF13BQ9Y275 285 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 F5P12259 2224 aa13.39□□□□□ -0.27
LIMS2-210ENST00000413578 SMIM28A0A1B0GU29 152 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 I3L4J1 428 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 CEBPBP17676 345 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 MUTP22033 750 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 MCM7P33993 719 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 EFNA5P52803 228 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 MRPL58Q14197 206 aaKnown RBP13.38□□□□□ -0.27
LIMS2-210ENST00000413578 PPP2R5AQ15172 486 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
LIMS2-210ENST00000413578 ATF7IP2Q5U623 682 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 TANGO2Q6ICL3 276 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 MAMSTRQ6ZN01 415 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 CEP120Q8N960 986 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 ZNF461Q8TAF7 563 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 ELSPBP1Q96BH3 223 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 MCRS1Q96EZ8 462 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 PTPRHQ9HD43 1115 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 HEBP1Q9NRV9 189 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 SMG5Q9UPR3 1016 aaKnown RBP13.38□□□□□ -0.27
LIMS2-210ENST00000413578 ACACBO00763 2458 aa13.38□□□□□ -0.27
LIMS2-210ENST00000413578 PATJQ8NI35 1801 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 WDR27A2RRH5 827 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 ABLIM1O14639 778 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 TRAPPC3O43617 180 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 MICAL2O94851 1124 aa13.37□□□□□ -0.27
LIMS2-210ENST00000413578 ATF2P15336 505 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms