RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 NSMFQ6X4W1 530 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 RGS9BPQ6ZS82 235 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 SRRM1Q8IYB3 904 aaKnown RBP18.78■□□□□ 0.6
SDCBP-202ENST00000413219 KIRREL3Q8IZU9 778 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 AGGF1Q8N302 714 aaeCLIP18.78■□□□□ 0.6
SDCBP-202ENST00000413219 CCDC89Q8N998 374 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 LRMDAQ9H2I8 198 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 FAM47DPA6NHR8 397 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 E7ENQ6 273 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 GDF11O95390 407 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 ARP10275 920 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 CETPP11597 493 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 STAT2P52630 851 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 POLGP54098 1239 aaPredicted RBP18.78■□□□□ 0.6
SDCBP-202ENST00000413219 SLC18A1P54219 525 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 YARSP54577 528 aaKnown RBP18.78■□□□□ 0.6
SDCBP-202ENST00000413219 SETDB1Q15047 1291 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 ANKRD20A2Q5SQ80 823 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 ANKRD20A1Q5TYW2 823 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 ANKRD20A3Q5VUR7 823 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 KRT39Q6A163 491 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 LARGE2Q8N3Y3 721 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 HELQQ8TDG4 1101 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 ATG4AQ8WYN0 398 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 ETNK1Q9HBU6 452 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 ANAPC7Q9UJX3 599 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 TRIM33Q9UPN9 1127 aa18.78■□□□□ 0.6
SDCBP-202ENST00000413219 IPO5O00410 1097 aaKnown RBP18.77■□□□□ 0.6
SDCBP-202ENST00000413219 GRIN3BO60391 1043 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 MYBL1P10243 752 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 FOXN2P32314 431 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 MAML1Q92585 1016 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 INPP5DQ92835 1189 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 TRIM11Q96F44 468 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 TMEM237Q96Q45 408 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 ACP6Q9NPH0 428 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 LRRC4BQ9NT99 713 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 USH1CQ9Y6N9 552 aa18.77■□□□□ 0.6
SDCBP-202ENST00000413219 SMNDC1O75940 238 aaKnown RBP eCLIP18.77■□□□□ 0.59
SDCBP-202ENST00000413219 ECM2O94769 699 aaPredicted RBP18.77■□□□□ 0.59
SDCBP-202ENST00000413219 ADRB2P07550 413 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 CACNB3P54284 484 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 IRX1P78414 480 aaPredicted RBP18.77■□□□□ 0.59
SDCBP-202ENST00000413219 CCNG2Q16589 344 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 DOK7Q18PE1 504 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 SPDYAQ5MJ70 313 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 RBM26Q5T8P6 1007 aaKnown RBP18.77■□□□□ 0.59
SDCBP-202ENST00000413219 SLC17A8Q8NDX2 589 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 SEMA4DQ92854 862 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 NT5C1BQ96P26 610 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 TIPINQ9BVW5 301 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 TMEM8AQ9HCN3 771 aa18.77■□□□□ 0.59
SDCBP-202ENST00000413219 CORO1CQ9ULV4 474 aaPredicted RBP18.77■□□□□ 0.59
SDCBP-202ENST00000413219 ATRNL1Q5VV63 1379 aa18.76■□□□□ 0.59
SDCBP-202ENST00000413219 FOXO6A8MYZ6 492 aa18.76■□□□□ 0.59
SDCBP-202ENST00000413219 PPP1R12AO14974 1030 aaPredicted RBP18.76■□□□□ 0.59
SDCBP-202ENST00000413219 P4HBP07237 508 aaKnown RBP18.76■□□□□ 0.59
SDCBP-202ENST00000413219 KLF1Q13351 362 aaPredicted RBP18.76■□□□□ 0.59
SDCBP-202ENST00000413219 BLMHQ13867 455 aa18.76■□□□□ 0.59
SDCBP-202ENST00000413219 TMEM63BQ5T3F8 832 aa18.76■□□□□ 0.59
SDCBP-202ENST00000413219 HAUS6Q7Z4H7 955 aa18.76■□□□□ 0.59
SDCBP-202ENST00000413219 TDRPQ86YL5 185 aa18.76■□□□□ 0.59
SDCBP-202ENST00000413219 UTP4Q969X6 686 aaKnown RBP18.76■□□□□ 0.59
SDCBP-202ENST00000413219 DDX27Q96GQ7 796 aaKnown RBP18.76■□□□□ 0.59
SDCBP-202ENST00000413219 DNAJC17Q9NVM6 304 aaKnown RBP18.76■□□□□ 0.59
SDCBP-202ENST00000413219 MRPL11Q9Y3B7 192 aaKnown RBP18.76■□□□□ 0.59
SDCBP-202ENST00000413219 RASA4BC9J798 803 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 PRPF4O43172 522 aaKnown RBP eCLIP18.75■□□□□ 0.59
SDCBP-202ENST00000413219 RASA4O43374 803 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 ASMTLO95671 621 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 WDR4P57081 412 aaKnown RBP18.75■□□□□ 0.59
SDCBP-202ENST00000413219 TRIP13Q15645 432 aaPredicted RBP18.75■□□□□ 0.59
SDCBP-202ENST00000413219 ZNF365Q70YC5 407 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 ENOSF1Q7L5Y1 443 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 TBK1Q9UHD2 729 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 DCTN3O75935 186 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 GH2P01242 217 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 GTF2H1P32780 548 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 FKBP1AP62942 108 aaKnown RBP18.75■□□□□ 0.59
SDCBP-202ENST00000413219 GRIK3Q13003 919 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 CMPK2Q5EBM0 449 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 IZUMO3Q5VZ72 239 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 MIER3Q7Z3K6 550 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 MCOLN2Q8IZK6 566 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 ZCCHC9Q8N567 271 aaKnown RBP18.75■□□□□ 0.59
SDCBP-202ENST00000413219 TEX9Q8N6V9 391 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 ZSWIM2Q8NEG5 633 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 TMC2Q8TDI7 906 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 CFAP57Q96MR6 1250 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 HERPUD2Q9BSE4 406 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 MYLK2Q9H1R3 596 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 SENP1Q9P0U3 644 aa18.75■□□□□ 0.59
SDCBP-202ENST00000413219 RPL26L1Q9UNX3 145 aaKnown RBP18.75■□□□□ 0.59
SDCBP-202ENST00000413219 MROH7Q68CQ1 1323 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 A0A1W2PRG0 241 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 LYPLA2O95372 231 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 UNGP13051 313 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-202ENST00000413219 GNAZP19086 355 aa18.74■□□□□ 0.59
SDCBP-202ENST00000413219 RRM1P23921 792 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms