RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 PPP1R37O75864 691 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 CLTAP09496 248 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 KCNE1P15382 129 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 KRT85P78386 507 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 ZBTB41Q5SVQ8 909 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 PPFIBP1Q86W92 1011 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 LEO1Q8WVC0 666 aaPredicted RBP20.56■□□□□ 0.88
TRIM56-202ENST00000412507 RIN2Q8WYP3 895 aaPredicted RBP20.56■□□□□ 0.88
TRIM56-202ENST00000412507 SPATA32Q96LK8 384 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 UROC1Q96N76 676 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 MSTO1Q9BUK6 570 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 STRA6Q9BX79 667 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 S1PR5Q9H228 398 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 IKZF4Q9H2S9 585 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 SLC38A7Q9NVC3 462 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 SCN1AP35498 2009 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 MUC3AQ02505 3323 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 A0A0B4J269 797 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 OGTO15294 1046 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 TEX28O15482 410 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 FAM189A1O60320 539 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 GCNT3O95395 438 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 HOXB8P17481 243 aaPredicted RBP20.55■□□□□ 0.88
TRIM56-202ENST00000412507 SSTR3P32745 418 aaPredicted RBP20.55■□□□□ 0.88
TRIM56-202ENST00000412507 CLCN4P51793 760 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 UPP1Q16831 310 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 FAM171A1Q5VUB5 890 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 DCLRE1AQ6PJP8 1040 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 CCDC65Q8IXS2 484 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 C18orf25Q96B23 403 aaPredicted RBP20.55■□□□□ 0.88
TRIM56-202ENST00000412507 HVCN1Q96D96 273 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 FGFBP2Q9BYJ0 223 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 TRIM9Q9C026 710 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 LRRC27Q9C0I9 530 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 RXFP1Q9HBX9 757 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 OLFML3Q9NRN5 406 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 PRKAG3Q9UGI9 489 aa20.55■□□□□ 0.88
TRIM56-202ENST00000412507 TMEM189-UBE2V1I3L0A0 370 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 B3GAT3O94766 335 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 MYBP10242 640 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 CASP5P51878 434 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 AMPD3Q01432 767 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 ZP2Q05996 745 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 SPAG1Q07617 926 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 KCNA1Q09470 495 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 KYAT1Q16773 422 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 TPRNQ4KMQ1 711 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 RTP2Q5QGT7 225 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 PRSS55Q6UWB4 352 aaPredicted RBP20.54■□□□□ 0.88
TRIM56-202ENST00000412507 CD300LGQ6UXG3 332 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 CEP57Q86XR8 500 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 GLYCTKQ8IVS8 523 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 ADHFE1Q8IWW8 467 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 GJD3Q8N144 294 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 C12orf76Q8N812 135 aaPredicted RBP20.54■□□□□ 0.88
TRIM56-202ENST00000412507 C3orf58Q8NDZ4 430 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 ATP6V1DQ9Y5K8 247 aa20.54■□□□□ 0.88
TRIM56-202ENST00000412507 TTC26A0AVF1 554 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 ADH1AP07327 375 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 RPL17P18621 184 aaKnown RBP20.53■□□□□ 0.88
TRIM56-202ENST00000412507 ASIC1P78348 528 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 ELAVL2Q12926 359 aaKnown RBP20.53■□□□□ 0.88
TRIM56-202ENST00000412507 ENOX2Q16206 610 aaKnown RBP20.53■□□□□ 0.88
TRIM56-202ENST00000412507 RARS2Q5T160 578 aaKnown RBP20.53■□□□□ 0.88
TRIM56-202ENST00000412507 L1TD1Q5T7N2 865 aaKnown RBP20.53■□□□□ 0.88
TRIM56-202ENST00000412507 ADALQ6DHV7 355 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 KANK3Q6NY19 840 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 SUSD6Q92537 303 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 ACCSQ96QU6 501 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 TTPALQ9BTX7 342 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 RPF1Q9H9Y2 349 aaKnown RBP20.53■□□□□ 0.88
TRIM56-202ENST00000412507 PLEKHA5Q9HAU0 1116 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 DZANK1Q9NVP4 752 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 CDH22Q9UJ99 828 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 KCNH3Q9ULD8 1083 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 PCDHB13Q9Y5F0 798 aa20.53■□□□□ 0.88
TRIM56-202ENST00000412507 LACTBL1A8MY62 500 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 PODXLO00592 558 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 CASP1P29466 404 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 BRCC3P46736 316 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 PPP2R3AQ06190 1150 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 SLFN12LQ6IEE8 588 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 PALB2Q86YC2 1186 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 GPR65Q8IYL9 337 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 TMEM130Q8N3G9 435 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 HPS3Q969F9 1004 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 KIF12Q96FN5 646 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 DDX27Q96GQ7 796 aaKnown RBP20.52■□□□□ 0.88
TRIM56-202ENST00000412507 FBXL18Q96ME1 805 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 C7orf25Q9BPX7 421 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 MAGEF1Q9HAY2 307 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRIM56-202ENST00000412507 FNIP2Q9P278 1114 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 TUBGCP4Q9UGJ1 667 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 CPSF3Q9UKF6 684 aaKnown RBP20.52■□□□□ 0.88
TRIM56-202ENST00000412507 EXOC7Q9UPT5 735 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 STYXL1Q9Y6J8 313 aa20.52■□□□□ 0.88
TRIM56-202ENST00000412507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.51■□□□□ 0.87
TRIM56-202ENST00000412507 A0A1B0GVL5 298 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 C19orf67A6NJJ6 358 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms