RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 AK7Q96M32 723 aa-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 C5orf34Q96MH7 638 aa-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 FAM110AQ9BQ89 295 aa-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 SENP6Q9GZR1 1112 aaPredicted RBP-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 UTS2RQ9UKP6 389 aa-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 DLGAP4Q9Y2H0 992 aa-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 PTPRZ1P23471 2315 aaPredicted RBP-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 BRWD1Q9NSI6 2320 aa-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 FRMPD2Q68DX3 1309 aaPredicted RBP-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 WDR17Q8IZU2 1322 aa-0.89□□□□□ -2.55
RNU4-88P-201ENST00000411220 CACNA1AO00555 2505 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 PIEZO1Q92508 2521 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 A0A0G2JNJ9 132 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZNF785A8K8V0 405 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 BTBD18B2RXH4 712 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZNF814B7Z6K7 855 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 BMPR1BO00238 502 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 UGDHO60701 494 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 LTFP02788 710 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 NHLRC4P0CG21 123 aaPredicted RBP-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 HGFP14210 728 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 PAMP19021 973 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 ANOS1P23352 680 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 FPR2P25090 351 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 EIF1AXP47813 144 aaKnown RBP-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 NHLH2Q02577 135 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 EGR4Q05215 589 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 KIAA0895LQ68EN5 471 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 FBXL19Q6PCT2 694 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 TRIM48Q8IWZ4 208 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 ARFGAP1Q8N6T3 406 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 ARL14EPQ8N8R7 260 aaPredicted RBP-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 DPF2Q92785 391 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 GLG1Q92896 1179 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 SLC7A6OSQ96CW6 309 aaPredicted RBP-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 ZFYVE19Q96K21 471 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 PDCD2LQ9BRP1 358 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 CPEB1Q9BZB8 566 aaKnown RBP-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 KCNN2Q9H2S1 579 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 Q9UFV3 132 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 HS3ST3B1Q9Y662 390 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 MYO18BQ8IUG5 2567 aa-0.9□□□□□ -2.55
RNU4-88P-201ENST00000411220 ITPR3Q14573 2671 aa-0.91□□□□□ -2.55
RNU4-88P-201ENST00000411220 COL12A1Q99715 3063 aa-0.91□□□□□ -2.55
RNU4-88P-201ENST00000411220 UNC79Q9P2D8 2635 aa-0.91□□□□□ -2.55
RNU4-88P-201ENST00000411220 IGLV3-10A0A075B6K4 115 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 A0A1W2PPI3 338 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 FAM221AA4D161 298 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 TPP1O14773 563 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 CLEC3AO75596 197 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 ARIH2O95376 493 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 CFIP05156 583 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 PCSK6P29122 969 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 HOXA11P31270 313 aaPredicted RBP-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 SEPHS1P49903 392 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 STAT5BP51692 787 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 SLC8A3P57103 927 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 AUHQ13825 339 aaKnown RBP-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 FAM189A2Q15884 450 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 MAN2A1Q16706 1144 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 NBPF8Q3BBV2 869 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 GAGE13Q4V321 117 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 SRGAP1Q7Z6B7 1085 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 KLHDC8BQ8IXV7 354 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 CCDC185Q8N715 623 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 PGLYRP2Q96PD5 576 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 MESP1Q9BRJ9 268 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 NYAP2Q9P242 653 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 KLHL13Q9P2N7 655 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 HEY2Q9UBP5 337 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 WNT16Q9UBV4 365 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 X6R8D5 127 aa-0.91□□□□□ -2.56
RNU4-88P-201ENST00000411220 NID2Q14112 1375 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 COL22A1Q8NFW1 1626 aaPredicted RBP-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 ZMYM2Q9UBW7 1377 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L15C9J2P7 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L13C9JLJ4 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L12C9JPN9 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L11C9JVI0 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L21D6R901 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L18D6R9N7 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L22D6RA61 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L17D6RBQ6 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L19D6RCP7 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L20D6RJB6 530 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 ARVCFO00192 962 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 WNT10BO00744 389 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 SCAMP3O14828 347 aaKnown RBP-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 ASAP2O43150 1006 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 STC2O76061 302 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 IGKV3-15P01624 115 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 C4BPAP04003 597 aaKnown RBP-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 NEFLP07196 543 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 HNRNPCP07910 306 aaKnown RBP eCLIP-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 FAHP16930 419 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 DRD3P35462 400 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 RBM25P49756 843 aaKnown RBP-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 GRIN1Q05586 938 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 ACSM2AQ08AH3 577 aa-0.92□□□□□ -2.56
RNU4-88P-201ENST00000411220 USP17L24Q0WX57 530 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms