RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 VSTM4Q8IW00 320 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 RABGGTAQ92696 567 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 SEMA4DQ92854 862 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 CGRRF1Q99675 332 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
PMS1-204ENST00000409823 ARL5CA6NH57 179 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 C9IYK1 514 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 CST3P01034 146 aaPredicted RBP13.61□□□□□ -0.23
PMS1-204ENST00000409823 POMCP01189 267 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 CXCL10P02778 98 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 KRT19P08727 400 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 TMEM191BP0C7N4 346 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 KRT39Q6A163 491 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 GJB7Q6PEY0 223 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 TUBGCP4Q9UGJ1 667 aa13.61□□□□□ -0.23
PMS1-204ENST00000409823 SMIM28A0A1B0GU29 152 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.6□□□□□ -0.23
PMS1-204ENST00000409823 PHACTR2O75167 634 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 CAPN2P17655 700 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 PBX1P40424 430 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 TMEM132DQ14C87 1099 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 DUOXA2Q1HG44 320 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 SPECC1LQ69YQ0 1117 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 WDR49Q8IV35 697 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 LSM14BQ9BX40 385 aaKnown RBP13.6□□□□□ -0.23
PMS1-204ENST00000409823 FTHL17Q9BXU8 183 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 TMEM8AQ9HCN3 771 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 MIOSQ9NXC5 875 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 RNF225M0QZC1 329 aaPredicted RBP13.6□□□□□ -0.23
PMS1-204ENST00000409823 IL18RAPO95256 599 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 C4BPAP04003 597 aaKnown RBP13.6□□□□□ -0.23
PMS1-204ENST00000409823 TRIM21P19474 475 aaKnown RBP13.6□□□□□ -0.23
PMS1-204ENST00000409823 PON1P27169 355 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 GATMP50440 423 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 SCNN1GP51170 649 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 CLDN10P78369 228 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 ARID5BQ14865 1188 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 SPOPLQ6IQ16 392 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 ALKAL1Q6UXT8 129 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 TRAPPC11Q7Z392 1133 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 TMEM199Q8N511 208 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 GSTCDQ8NEC7 633 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 SIK3Q9Y2K2 1263 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 PTGESO14684 152 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 VNN1O95497 513 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 ITGB3P05106 788 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 KYAT1Q16773 422 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 ASB7Q9H672 318 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 RSAD1Q9HA92 442 aa13.6□□□□□ -0.23
PMS1-204ENST00000409823 ZNF623O75123 536 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 PIK3CAP42336 1068 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 SOX4Q06945 474 aaPredicted RBP13.59□□□□□ -0.23
PMS1-204ENST00000409823 IKBKEQ14164 716 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 ZACNQ401N2 412 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 TRIM65Q6PJ69 517 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 FBXL13Q8NEE6 735 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 ANKRD36BP1Q96IX9 119 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 ERGIC2Q96RQ1 377 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 TRAIPQ9BWF2 469 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 NLRC4Q9NPP4 1024 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 CNTN3Q9P232 1028 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 TRIP11Q15643 1979 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 ALPK3Q96L96 1907 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 SZT2Q5T011 3432 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 IGFBP6P24592 240 aaPredicted RBP13.59□□□□□ -0.23
PMS1-204ENST00000409823 RAB27AP51159 221 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 EPHB4P54760 987 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 ADKP55263 362 aaKnown RBP13.59□□□□□ -0.23
PMS1-204ENST00000409823 C16orf59Q7L2K0 433 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 RRAGAQ7L523 313 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 MRPL10Q7Z7H8 261 aaKnown RBP13.59□□□□□ -0.23
PMS1-204ENST00000409823 ZNF598Q86UK7 904 aaKnown RBP13.59□□□□□ -0.23
PMS1-204ENST00000409823 HACE1Q8IYU2 909 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 APBB2Q92870 758 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
PMS1-204ENST00000409823 RAB20Q9NX57 234 aa13.59□□□□□ -0.23
PMS1-204ENST00000409823 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 PPEF2O14830 753 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 PARNO95453 639 aaKnown RBP13.58□□□□□ -0.24
PMS1-204ENST00000409823 HLA-DRAP01903 254 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 TNNC2P02585 160 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 GYPCP04921 128 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 CASP14P31944 242 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 CETN1Q12798 172 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 NCOA4Q13772 614 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 CLLU1OSQ5K130 101 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 C15orf39Q6ZRI6 1047 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 PLEKHA5Q9HAU0 1116 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 DPP3Q9NY33 737 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 SIX4Q9UIU6 781 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 PCDHB7Q9Y5E2 793 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 TANC1Q9C0D5 1861 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 STX10O60499 249 aa13.58□□□□□ -0.24
PMS1-204ENST00000409823 NOL4O94818 638 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms