RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ZNF804AQ7Z570 1209 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 MIER2Q8N344 545 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.31□□□□□ -1.24
LSM5-203ENST00000409782 USP44Q9H0E7 712 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 SP110Q9HB58 689 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 DNAJC28Q9NX36 388 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 KCNG1Q9UIX4 513 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 DSEQ9UL01 958 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 DNM3Q9UQ16 869 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 ATP23Q9Y6H3 246 aa7.31□□□□□ -1.24
LSM5-203ENST00000409782 ARAP2Q8WZ64 1704 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 H3BML4 177 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 KRIT1O00522 736 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 PMM2O15305 246 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 SH3BP5O60239 455 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 MAFKO60675 156 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 FKTNO75072 461 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 TCEA3O75764 348 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 POU2F2P09086 479 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 IL1R1P14778 569 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 FKBP1AP62942 108 aaKnown RBP7.3□□□□□ -1.24
LSM5-203ENST00000409782 DUSP4Q13115 394 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 KCNK18Q7Z418 384 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 CXorf67Q86X51 503 aaPredicted RBP7.3□□□□□ -1.24
LSM5-203ENST00000409782 PLEKHO2Q8TD55 490 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 DIS3LQ8TF46 1054 aaKnown RBP7.3□□□□□ -1.24
LSM5-203ENST00000409782 RAX2Q96IS3 184 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 MTA3Q9BTC8 594 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 GLIS2Q9BZE0 524 aaPredicted RBP7.3□□□□□ -1.24
LSM5-203ENST00000409782 TMEM60Q9H2L4 133 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 CD209Q9NNX6 404 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 NLRC4Q9NPP4 1024 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 GNL3LQ9NVN8 582 aaKnown RBP7.3□□□□□ -1.24
LSM5-203ENST00000409782 GGA3Q9NZ52 723 aa7.3□□□□□ -1.24
LSM5-203ENST00000409782 PUF60Q9UHX1 559 aaKnown RBP7.3□□□□□ -1.24
LSM5-203ENST00000409782 ABT1Q9ULW3 272 aaKnown RBP7.3□□□□□ -1.24
LSM5-203ENST00000409782 COL1A1P02452 1464 aaPredicted RBP7.3□□□□□ -1.24
LSM5-203ENST00000409782 A0A1W2PQ45 241 aaPredicted RBP7.29□□□□□ -1.24
LSM5-203ENST00000409782 A0A1W2PQY0 241 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 FAM227AF5H4B4 570 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 TPP1O14773 563 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 NKRFO15226 690 aaKnown RBP eCLIP7.29□□□□□ -1.24
LSM5-203ENST00000409782 PAX4O43316 350 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 TAF5LO75529 589 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 CELF2O95319 508 aaKnown RBP7.29□□□□□ -1.24
LSM5-203ENST00000409782 C5AR1P21730 350 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 PTX3P26022 381 aaPredicted RBP7.29□□□□□ -1.24
LSM5-203ENST00000409782 SLC5A3P53794 718 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 AK2P54819 239 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 ATF7IPQ6VMQ6 1270 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 EP400NLQ6ZTU2 488 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 OXR1Q8N573 874 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 VGLL2Q8N8G2 317 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 DCPSQ96C86 337 aaKnown RBP7.29□□□□□ -1.24
LSM5-203ENST00000409782 C1GALT1C1Q96EU7 318 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 HHIPL1Q96JK4 782 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 SELENOOQ9BVL4 669 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 MS4A5Q9H3V2 200 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 MYOZ2Q9NPC6 264 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 HDAC9Q9UKV0 1011 aa7.29□□□□□ -1.24
LSM5-203ENST00000409782 FAM205AQ6ZU69 1335 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 PAPPA2Q9BXP8 1791 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 C22orf46C9J442 243 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 SNAP23O00161 211 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 EYA2O00167 538 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 SCDO00767 359 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 CIAO1O76071 339 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 PAPLNO95428 1278 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 GNAI3P08754 354 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 ZGLP1P0C6A0 271 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 FPR2P25090 351 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 SERPINB3P29508 390 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 ECE1P42892 770 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 SLC6A11P48066 632 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 TM4SF4P48230 202 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 RFX5P48382 616 aaPredicted RBP7.28□□□□□ -1.24
LSM5-203ENST00000409782 MANFP55145 182 aaKnown RBP7.28□□□□□ -1.24
LSM5-203ENST00000409782 FAM193AP78312 1265 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 PUM3Q15397 648 aaKnown RBP7.28□□□□□ -1.24
LSM5-203ENST00000409782 DEFB115Q30KQ5 88 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 METTL24Q5JXM2 366 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 CST9Q5W186 159 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 TTLL5Q6EMB2 1281 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 KCTD1Q719H9 257 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 SPPL2CQ8IUH8 684 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 PDZD8Q8NEN9 1154 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 PIP4K2CQ8TBX8 421 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 PHOSPHO1Q8TCT1 267 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 MAP3K14Q99558 947 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 MEIS3Q99687 375 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 PUS3Q9BZE2 481 aaKnown RBP7.28□□□□□ -1.24
LSM5-203ENST00000409782 GTPBP4Q9BZE4 634 aaKnown RBP7.28□□□□□ -1.24
LSM5-203ENST00000409782 PTPRHQ9HD43 1115 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 PLCB1Q9NQ66 1216 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 C19orf73Q9NVV2 129 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 MARCH2Q9P0N8 246 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 MSRAQ9UJ68 235 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 DAAM1Q9Y4D1 1078 aa7.28□□□□□ -1.24
LSM5-203ENST00000409782 FADS2P1A8MWK0 482 aa7.27□□□□□ -1.25
LSM5-203ENST00000409782 ADM5C9JUS6 153 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms