RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 DPP3Q9NY33 737 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 BZW2Q9Y6E2 419 aaKnown RBP12.17□□□□□ -0.46
SNX13-202ENST00000409604 INHAP05111 366 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 GUCY2CP25092 1073 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 DUSP28Q4G0W2 176 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 ZBTB41Q5SVQ8 909 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 TRIM65Q6PJ69 517 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 MPZL3Q6UWV2 235 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX13-202ENST00000409604 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 RYBPQ8N488 228 aaPredicted RBP12.17□□□□□ -0.46
SNX13-202ENST00000409604 TC2NQ8N9U0 490 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 APPL2Q8NEU8 664 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 YME1L1Q96TA2 773 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 KCND2Q9NZV8 630 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 KLRC4O43908 158 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 EIF4BP23588 611 aaKnown RBP12.17□□□□□ -0.46
SNX13-202ENST00000409604 ANXA13P27216 316 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 ADCY8P40145 1251 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 GUCY2DQ02846 1103 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 CBWD6Q4V339 395 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 CBWD3Q5JTY5 395 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 CBWD5Q5RIA9 395 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 PDXDC1Q6P996 788 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 SYCE1Q8N0S2 351 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 THEM5Q8N1Q8 247 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 KCTD6Q8NC69 237 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 RSAD2Q8WXG1 361 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 NUP85Q9BW27 656 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 PCDHB7Q9Y5E2 793 aa12.17□□□□□ -0.46
SNX13-202ENST00000409604 MARF1Q9Y4F3 1742 aaKnown RBP12.17□□□□□ -0.46
SNX13-202ENST00000409604 GPR25O00155 361 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 SGPL1O95470 568 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 CLTAP09496 248 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 HPDP32754 393 aaPredicted RBP12.16□□□□□ -0.46
SNX13-202ENST00000409604 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
SNX13-202ENST00000409604 ABHD15Q6UXT9 468 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 BPIFA3Q9BQP9 254 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 TSPYL1Q9H0U9 437 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 TRPV6Q9H1D0 765 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 PIDD1Q9HB75 910 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 NUDT5Q9UKK9 219 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 ADGRG1Q9Y653 693 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 SAT1P21673 171 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 MLH1P40692 756 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 SMTNL2Q2TAL5 461 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 GPAT2Q6NUI2 795 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 ZFP42Q96MM3 310 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 WDR24Q96S15 920 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 TRPC7Q9HCX4 862 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 CYP3A7-CYP3A51PA0A087WV96 503 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 A0A087X0T9 212 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 MED7O43513 233 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 FAM228BP0C875 321 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 CYP3A7P24462 503 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 PON1P27169 355 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 ALDH7A1P49419 539 aaKnown RBP12.16□□□□□ -0.46
SNX13-202ENST00000409604 VEGFBP49765 207 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 SCNN1GP51170 649 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
SNX13-202ENST00000409604 OTOP2Q7RTS6 562 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 KDELC2Q7Z4H8 507 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 CCDC26Q8TAB7 109 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 SLC20A1Q8WUM9 679 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 PANX2Q96RD6 677 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 PACSIN1Q9BY11 444 aa12.16□□□□□ -0.46
SNX13-202ENST00000409604 TBKBP1A7MCY6 615 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 PRPSAP2O60256 369 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 RECQL4O94761 1208 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 GJB6O95452 261 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 ACO1P21399 889 aaKnown RBP12.15□□□□□ -0.46
SNX13-202ENST00000409604 GALCP54803 685 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 PPP3CAQ08209 521 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 SGO2Q562F6 1265 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 ERLEC1Q96DZ1 483 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 SCLYQ96I15 445 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 PTPN18Q99952 460 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 TTC7AQ9ULT0 858 aaPredicted RBP12.15□□□□□ -0.46
SNX13-202ENST00000409604 ESYT3A0FGR9 886 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 LACTBL1A8MY62 500 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 SGK1O00141 431 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 ZNF185O15231 689 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 SRGAP2BP0DMP2 458 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 SP100P23497 879 aaPredicted RBP12.15□□□□□ -0.46
SNX13-202ENST00000409604 CCND3P30281 292 aaPredicted RBP12.15□□□□□ -0.46
SNX13-202ENST00000409604 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 CCDC63Q8NA47 563 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 C1orf131Q8NDD1 294 aaKnown RBP12.15□□□□□ -0.46
SNX13-202ENST00000409604 LENG9Q96B70 501 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 STK25O00506 426 aa12.15□□□□□ -0.46
SNX13-202ENST00000409604 EIF3DO15371 548 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNX13-202ENST00000409604 FGGP02679 453 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms