RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 HOXA9P31269 272 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 ZNF131P52739 623 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 NUBP1P53384 320 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 OSTNP61366 133 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 PPP2R3AQ06190 1150 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 MCL1Q07820 350 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 NAB2Q15742 525 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 UPP1Q16831 310 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 GLRA4Q5JXX5 417 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 RTP2Q5QGT7 225 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 CCDC73Q6ZRK6 1079 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 TAS1R3Q7RTX0 852 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 TAS1R1Q7RTX1 841 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 HAUS6Q7Z4H7 955 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 PALB2Q86YC2 1186 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 CD302Q8IX05 232 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 FBXL6Q8N531 539 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 KREMEN2Q8NCW0 462 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 HASPINQ8TF76 798 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 PBXIP1Q96AQ6 731 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 HVCN1Q96D96 273 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 OXCT2Q9BYC2 517 aaPredicted RBP9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 PRKD2Q9BZL6 878 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 LRRC27Q9C0I9 530 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 IRF2BPLQ9H1B7 796 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 ZHX3Q9H4I2 956 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 POLD4Q9HCU8 107 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 WDR6Q9NNW5 1121 aaKnown RBP9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 IGSF9Q9P2J2 1179 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 SEL1LQ9UBV2 794 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 FBXW11Q9UKB1 542 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 SRPRBQ9Y5M8 271 aaKnown RBP9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 BACE2Q9Y5Z0 518 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 CITO14578 2027 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 F8W810 466 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 PODXLO00592 558 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 STX6O43752 255 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 GAP43P17677 238 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 GBP2P32456 591 aaPredicted RBP9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 DDIT3P35638 169 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 CLCNKBP51801 687 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 RESTQ13127 1097 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 RAB33AQ14088 237 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 DHX8Q14562 1220 aaKnown RBP9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 MCM6Q14566 821 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 KARSQ15046 597 aaKnown RBP9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 UVSSAQ2YD98 709 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 PPM1LQ5SGD2 360 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 SLFN12LQ6IEE8 588 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 LILRA6Q6PI73 481 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 PRSS55Q6UWB4 352 aaPredicted RBP9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 ALKAL1Q6UXT8 129 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 HFE2Q6ZVN8 426 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 SV2BQ7L1I2 683 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 CEP120Q8N960 986 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 APPL2Q8NEU8 664 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 LNX1Q8TBB1 728 aaPredicted RBP9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 RABGGTAQ92696 567 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 SNX21Q969T3 373 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 B3GALT6Q96L58 329 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 ZNF396Q96N95 335 aaPredicted RBP9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 PAAF1Q9BRP4 392 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 ST6GALNAC4Q9H4F1 302 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 MTRRQ9UBK8 725 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 TBX20Q9UMR3 447 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 UBQLN1Q9UMX0 589 aaKnown RBP9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 EXOC7Q9UPT5 735 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 USP20Q9Y2K6 914 aa9.91□□□□□ -0.82
SNORD88A-201ENST00000408314 C5orf42Q9H799 3197 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 TECTAO75443 2155 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 ABLIM1O14639 778 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 OGTO15294 1046 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 C8AP07357 584 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 WEE2P0C1S8 567 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 RPL17P18621 184 aaKnown RBP9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 CYP3A5P20815 502 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 ELF1P32519 619 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 MCM4P33991 863 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 POU5F1Q01860 360 aaKnown RBP9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 TDGQ13569 410 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 ALCAMQ13740 583 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 POSTNQ15063 836 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 STK38Q15208 465 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 PTPAQ15257 358 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 ARSHQ5FYA8 562 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 RRAGBQ5VZM2 374 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 ZNF280DQ6N043 979 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 STXBP4Q6ZWJ1 553 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 MAP4K3Q8IVH8 894 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 GLYCTKQ8IVS8 523 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 MSTO1Q9BUK6 570 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 MFSD1Q9H3U5 465 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 RPF1Q9H9Y2 349 aaKnown RBP9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 BLOC1S4Q9NUP1 217 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 EPS15L1Q9UBC2 864 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 FBXO2Q9UK22 296 aaPredicted RBP9.9□□□□□ -0.82
SNORD88A-201ENST00000408314 MAFFQ9ULX9 164 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms