RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 PIK3CAP42336 1068 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 TRPC3Q13507 836 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 NCOA4Q13772 614 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 SNX17Q15036 470 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 ENOX2Q16206 610 aaKnown RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 KCNA10Q16322 511 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 KIZQ2M2Z5 673 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 TDRD10Q5VZ19 366 aaKnown RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 EEF1DP3Q658K8 133 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 ALKBH5Q6P6C2 394 aaKnown RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 SERINC5Q86VE9 423 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 THNSL1Q8IYQ7 743 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 HACE1Q8IYU2 909 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 USP38Q8NB14 1042 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 ACRBPQ8NEB7 543 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 TRIM58Q8NG06 486 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 SLC30A5Q8TAD4 765 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 SEMA4DQ92854 862 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 LZTFL1Q9NQ48 299 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 TOPORSQ9NS56 1045 aaPredicted RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 ADAMTS1Q9UHI8 967 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 NAGPAQ9UK23 515 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 CNTN6Q9UQ52 1028 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 REXO2Q9Y3B8 237 aaKnown RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 R3HCC1Q9Y3T6 440 aaKnown RBP11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 CITO14578 2027 aa11.11□□□□□ -0.63
SNORD88C-201ENST00000408061 MROH7Q68CQ1 1323 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 A0A087X0T9 212 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 ANO9A1A5B4 782 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 B4GALT5O43286 388 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 TACC1O75410 805 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 H2AFZP0C0S5 128 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 FAM228BP0C875 321 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 HARSP12081 509 aaKnown RBP11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 P4HA1P13674 534 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 ELNP15502 786 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 CAPN2P17655 700 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 CCND3P30281 292 aaPredicted RBP11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 HOXA11P31270 313 aaPredicted RBP11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 GRK4P32298 578 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 YARSP54577 528 aaKnown RBP11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 MRPS6P82932 125 aaKnown RBP11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 ARID5AQ03989 594 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 PTK7Q13308 1070 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 ARHGAP44Q17R89 818 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 SYT10Q6XYQ8 523 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 H2AFVQ71UI9 128 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 ARHGEF19Q8IW93 802 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 ZNF296Q8WUU4 475 aaPredicted RBP11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 LENG1Q96BZ8 264 aaPredicted RBP11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 GLT1D1Q96MS3 346 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 AGPAT1Q99943 283 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 SYT11Q9BT88 431 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 GPR88Q9GZN0 384 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 DNAI1Q9UI46 699 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 ITGA11Q9UKX5 1188 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 PCDHB2Q9Y5E7 798 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 TRPV2Q9Y5S1 764 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 ANK1P16157 1881 aa11.1□□□□□ -0.63
SNORD88C-201ENST00000408061 CTAGE9A4FU28 777 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 MYADML2A6NDP7 307 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 ZNF263O14978 683 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 GPR182O15218 404 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 VNN1O95497 513 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 PLEKP08567 350 aaPredicted RBP11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 PRLRP16471 622 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 TNFSF9P41273 254 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 ACLYP53396 1101 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 APBA1Q02410 837 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 CUL2Q13617 745 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 TCEAL1Q15170 157 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 FAM26DQ5JW98 314 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 GJB7Q6PEY0 223 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 TRIM72Q6ZMU5 477 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 RUFY4Q6ZNE9 571 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 OR5B17Q8NGF7 314 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 ZNF592Q92610 1267 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 SECISBP2LQ93073 1101 aaKnown RBP11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 ZBTB10Q96DT7 871 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 KREMEN1Q96MU8 473 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 NOX5Q96PH1 765 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 ALS2CR12Q96Q35 445 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 DNAI2Q9GZS0 605 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 L2HGDHQ9H9P8 463 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 NENFQ9UMX5 172 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 GUCA1BQ9UMX6 200 aa11.09□□□□□ -0.63
SNORD88C-201ENST00000408061 RALGAPA2Q2PPJ7 1873 aa11.08□□□□□ -0.64
SNORD88C-201ENST00000408061 ANKRD62A6NC57 917 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms