RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 MYOZ2Q9NPC6 264 aa17.45■□□□□ 0.38
CDK11B-204ENST00000407249 MRPL11Q9Y3B7 192 aaKnown RBP17.45■□□□□ 0.38
CDK11B-204ENST00000407249 ZMYM2Q9UBW7 1377 aa17.45■□□□□ 0.38
CDK11B-204ENST00000407249 FAM170AA1A519 330 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 CFAP73A6NFT4 308 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 A6NHS1 94 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 PODXLO00592 558 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 ACER1Q8TDN7 264 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 SFI1A8K8P3 1242 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 MYCLP1P12525 358 aaPredicted RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 HSPA6P17066 643 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 TNFAIP3P21580 790 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 HADHBP55084 474 aaKnown RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 ZNF280AP59817 542 aaPredicted RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 NFIL3Q16649 462 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 CBWD6Q4V339 395 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 CBWD3Q5JTY5 395 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 CBWD5Q5RIA9 395 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 ZDHHC14Q8IZN3 488 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 MKNK1Q9BUB5 465 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 TMEM39BQ9GZU3 492 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 MTRF1LQ9UGC7 380 aaKnown RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 PARP2Q9UGN5 583 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 FAM86B1E9PN63 330 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 WNT10BO00744 389 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 EIF3DO15371 548 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 RIPK2O43353 540 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 CLTAP09496 248 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 FAM86B2P0C5J1 330 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 CTNNA2P26232 953 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 SLCO1A2P46721 670 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 ACCSLQ4AC99 568 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 FAM133BQ5BKY9 247 aaKnown RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 TTC27Q6P3X3 843 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 TBC1D1Q86TI0 1168 aaPredicted RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 PNMA8AQ86V59 439 aaPredicted RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 RHOT2Q8IXI1 618 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 SPICE1Q8N0Z3 855 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 KRT35Q92764 455 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 STMN4Q9H169 189 aaPredicted RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 ABCF3Q9NUQ8 709 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 SEPT11Q9NVA2 429 aaKnown RBP17.44■□□□□ 0.38
CDK11B-204ENST00000407249 APEX2Q9UBZ4 518 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 RABGAP1Q9Y3P9 1069 aa17.44■□□□□ 0.38
CDK11B-204ENST00000407249 MIF4GDA9UHW6 222 aaKnown RBP17.43■□□□□ 0.38
CDK11B-204ENST00000407249 RASGRF2O14827 1237 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 SNX3O60493 162 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 SMIM24O75264 130 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 KCNA2P16389 499 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 GAP43P17677 238 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 FGFR4P22455 802 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 IFNAR2P48551 515 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 AUHQ13825 339 aaKnown RBP17.43■□□□□ 0.38
CDK11B-204ENST00000407249 CNGA2Q16280 664 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 PACS1Q6VY07 963 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 NSRP1Q9H0G5 558 aaKnown RBP17.43■□□□□ 0.38
CDK11B-204ENST00000407249 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 EBF2Q9HAK2 575 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 EYA4O95677 639 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 POLR2MP0CAP2 368 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 RARGP13631 454 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 NMT1P30419 496 aaKnown RBP17.43■□□□□ 0.38
CDK11B-204ENST00000407249 PDE6CP51160 858 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 SNAP25P60880 206 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 ZNF268Q14587 947 aaPredicted RBP17.43■□□□□ 0.38
CDK11B-204ENST00000407249 KRT72Q14CN4 511 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 SMUG1Q53HV7 270 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 C11orf63Q6NUN7 778 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 RINT1Q6NUQ1 792 aa17.43■□□□□ 0.38
CDK11B-204ENST00000407249 INTS2Q9H0H0 1204 aaKnown RBP17.43■□□□□ 0.38
CDK11B-204ENST00000407249 MARCKSL1P49006 195 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 DYNC1I2Q13409 638 aaKnown RBP17.42■□□□□ 0.38
CDK11B-204ENST00000407249 CTTNQ14247 550 aaKnown RBP17.42■□□□□ 0.38
CDK11B-204ENST00000407249 KIF22Q14807 665 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 ZC2HC1CQ53FD0 456 aaPredicted RBP17.42■□□□□ 0.38
CDK11B-204ENST00000407249 MFSD5Q6N075 450 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 CCDC137Q6PK04 289 aaKnown RBP17.42■□□□□ 0.38
CDK11B-204ENST00000407249 OTUD6AQ7L8S5 288 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 ANKRD13BQ86YJ7 626 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 UBL4BQ8N7F7 174 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 VAV3Q9UKW4 847 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 OAS1P00973 400 aaKnown RBP17.42■□□□□ 0.38
CDK11B-204ENST00000407249 ZNF76P36508 570 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 COG2Q14746 738 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 TAOK1Q7L7X3 1001 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 GBP7Q8N8V2 638 aaPredicted RBP17.42■□□□□ 0.38
CDK11B-204ENST00000407249 NSMCE1Q8WV22 266 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 NACC2Q96BF6 587 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 STAMBPL1Q96FJ0 436 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 ZSWIM1Q9BR11 485 aa17.42■□□□□ 0.38
CDK11B-204ENST00000407249 DBR1Q9UK59 544 aaKnown RBP17.42■□□□□ 0.38
CDK11B-204ENST00000407249 MSH4O15457 936 aa17.41■□□□□ 0.38
CDK11B-204ENST00000407249 ALAS1P13196 640 aa17.41■□□□□ 0.38
CDK11B-204ENST00000407249 PTK7Q13308 1070 aa17.41■□□□□ 0.38
CDK11B-204ENST00000407249 ARHGAP44Q17R89 818 aa17.41■□□□□ 0.38
CDK11B-204ENST00000407249 NUGGCQ68CJ6 796 aa17.41■□□□□ 0.38
CDK11B-204ENST00000407249 EIF2AK1Q9BQI3 630 aaKnown RBP17.41■□□□□ 0.38
CDK11B-204ENST00000407249 GMEB1Q9Y692 573 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms