RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ZFP91Q96JP5 570 aaPredicted RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 GPRC5CQ9NQ84 441 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.13□□□□□ -1.75
RTN4-209ENST00000405240 TMOD2Q9NZR1 351 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 PASKQ96RG2 1323 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 CCT8L1PA6NM43 557 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 VWA5AO00534 786 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 WNT10BO00744 389 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 MAGEB2O15479 319 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 EXTL3O43909 919 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 CTNND1O60716 968 aaKnown RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 ABHD2P08910 425 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 ALADP13716 330 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 ICAM3P32942 547 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 SCTRP47872 440 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 PLTPP55058 493 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 PEX3P56589 373 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 RPS6P62753 249 aaKnown RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 RASA2Q15283 850 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 DENND2CQ68D51 928 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 MAIP1Q8WWC4 291 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 CABS1Q96KC9 395 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 CAMKK2Q96RR4 588 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 FOXP3Q9BZS1 431 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 AZI2Q9H6S1 392 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 KIAA1586Q9HCI6 787 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 ACP6Q9NPH0 428 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 ZNF236Q9UL36 1845 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 CNTNAP2Q9UHC6 1331 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 CLRN2A0PK11 232 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 TMEM150BA6NC51 233 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 SPATA31C2B4DYI2 1134 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 PROSCO94903 275 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 GJB6O95452 261 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 GCAP28676 217 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 HPDP32754 393 aaPredicted RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 CDH5P33151 784 aaPredicted RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 ARL2P36404 184 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 WNT7BP56706 349 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 MAP2K1Q02750 393 aaPredicted RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 IFT88Q13099 833 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 RIPK1Q13546 671 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 MESDQ14696 234 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 CCNG2Q16589 344 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 TAZQ16635 292 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 ZC3H12AQ5D1E8 599 aaKnown RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 PPP1R15BQ5SWA1 713 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 TMEM63BQ5T3F8 832 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 HIBCHQ6NVY1 386 aaPredicted RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 PPP1R2P3Q6NXS1 205 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 ANKS1BQ7Z6G8 1248 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 TDRPQ86YL5 185 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 FUKQ8N0W3 1084 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 RDH13Q8NBN7 331 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 MDM1Q8TC05 714 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 BBXQ8WY36 941 aaPredicted RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 BTBD6Q96KE9 485 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 NT5C1BQ96P26 610 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 TACO1Q9BSH4 297 aaKnown RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 NIFKQ9BYG3 293 aaKnown RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 PHACTR1Q9C0D0 580 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 MTFR1LQ9H019 292 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 SLC40A1Q9NP59 571 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 PPANQ9NQ55 473 aaKnown RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 HOMER3Q9NSC5 361 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 MTRF1LQ9UGC7 380 aaKnown RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 MTUS1Q9ULD2 1270 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 ZNRF3Q9ULT6 936 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 PCDHA10Q9Y5I2 948 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 MAFBQ9Y5Q3 323 aaPredicted RBP4.13□□□□□ -1.75
RTN4-209ENST00000405240 CAPN7Q9Y6W3 813 aa4.13□□□□□ -1.75
RTN4-209ENST00000405240 ATMINO43313 823 aaPredicted RBP4.12□□□□□ -1.75
RTN4-209ENST00000405240 DGAT1O75907 488 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 ECEL1O95672 775 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 TTC4O95801 387 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 APBA3O96018 575 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 ATP4AP20648 1035 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 CHKAP35790 457 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 PDE6CP51160 858 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 LMNB2Q03252 620 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 ACVR2BQ13705 512 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 GKAP1Q5VSY0 366 aaPredicted RBP4.12□□□□□ -1.75
RTN4-209ENST00000405240 TRIM72Q6ZMU5 477 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 RGS9BPQ6ZS82 235 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 CACNA2D3Q8IZS8 1091 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 NIPA2Q8N8Q9 360 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 EPS8L3Q8TE67 593 aaKnown RBP4.12□□□□□ -1.75
RTN4-209ENST00000405240 IPO4Q8TEX9 1081 aaKnown RBP4.12□□□□□ -1.75
RTN4-209ENST00000405240 ZNF653Q96CK0 615 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 SNF8Q96H20 258 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 POP1Q99575 1024 aaKnown RBP4.12□□□□□ -1.75
RTN4-209ENST00000405240 ZNF341Q9BYN7 854 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 STMN4Q9H169 189 aaPredicted RBP4.12□□□□□ -1.75
RTN4-209ENST00000405240 CDC42EP4Q9H3Q1 356 aaKnown RBP4.12□□□□□ -1.75
RTN4-209ENST00000405240 RABEP2Q9H5N1 569 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 KLC4Q9NSK0 619 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 KCNG1Q9UIX4 513 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 PCDHB2Q9Y5E7 798 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 PTPRJQ12913 1337 aa4.12□□□□□ -1.75
RTN4-209ENST00000405240 ZNF541Q9H0D2 1346 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms