RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 SPRED3Q2MJR0 410 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 CCDC14Q49A88 953 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 ZC2HC1CQ53FD0 456 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-202ENST00000405010 BRDTQ58F21 947 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-202ENST00000405010 RFX6Q8HWS3 928 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 RHPN2Q8IUC4 686 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 PASD1Q8IV76 773 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 ADGRF4Q8IZF3 695 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 JDP2Q8WYK2 163 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 TRAPPC9Q96Q05 1148 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 SEL1LQ9UBV2 794 aa7.83□□□□□ -1.16
HDAC9-202ENST00000405010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.83□□□□□ -1.16
HDAC9-202ENST00000405010 EYA4O95677 639 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 RASA1P20936 1047 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 AP3B2Q13367 1082 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 MTM1Q13496 603 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 CNGA3Q16281 694 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 PARP6Q2NL67 630 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 IRF2BP2Q7Z5L9 587 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 PRELID2Q8N945 189 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 PPWD1Q96BP3 646 aaKnown RBP7.82□□□□□ -1.16
HDAC9-202ENST00000405010 ZNF317Q96PQ6 595 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-202ENST00000405010 SERPINI1Q99574 410 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 ZNF577Q9BSK1 485 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 WDR11Q9BZH6 1224 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 SLC13A1Q9BZW2 595 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 LOC102724428A0A0B4J2F2 783 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 FAM200BP0CF97 657 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 ATP6V1B1P15313 513 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 SIK1P57059 783 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 BTKQ06187 659 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 GRIK3Q13003 919 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 RASA3Q14644 834 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 ANKRD20A4Q4UJ75 823 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 FAM43BQ6ZT52 329 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-202ENST00000405010 VGLL2Q8N8G2 317 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 RMDN2Q96LZ7 410 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 ACAP3Q96P50 834 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 BTBD10Q9BSF8 475 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 MKNK1Q9BUB5 465 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 CALN1Q9BXU9 219 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 SLCO1B3Q9NPD5 702 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 KLHL11Q9NVR0 708 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 SCINQ9Y6U3 715 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 MON2Q7Z3U7 1717 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 RSPH10B2B2RC85 870 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 ZBED4O75132 1171 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 KRT36O76013 467 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 RSPH10BP0C881 870 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 POLR2MP0CAP2 368 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 RALAP11233 206 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 SP100P23497 879 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-202ENST00000405010 ZYXQ15942 572 aaKnown RBP7.82□□□□□ -1.16
HDAC9-202ENST00000405010 EMC10Q5UCC4 262 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 PCGF5Q86SE9 256 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 LCA5Q86VQ0 697 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 EIF2AK1Q9BQI3 630 aaKnown RBP7.82□□□□□ -1.16
HDAC9-202ENST00000405010 TMEM117Q9H0C3 514 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 PPCSQ9HAB8 311 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 NMRK1Q9NWW6 199 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 NINJ2Q9NZG7 142 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 IL1RAPL1Q9NZN1 696 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 NDUFA13Q9P0J0 144 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 EPS15L1Q9UBC2 864 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 GTF3C4Q9UKN8 822 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 PEAK1Q9H792 1746 aa7.82□□□□□ -1.16
HDAC9-202ENST00000405010 TNS3Q68CZ2 1445 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 GNPATO15228 680 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 LGR5O75473 907 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 NOL4O94818 638 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 GH1P01241 217 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 SNAP25P60880 206 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 DMP1Q13316 513 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-202ENST00000405010 QRICH1Q2TAL8 776 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 ARMC3Q5W041 872 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 GRAMD4Q6IC98 578 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 C11orf63Q6NUN7 778 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 SCUBE1Q8IWY4 988 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 RASGEF1CQ8N431 466 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 SLC20A1Q8WUM9 679 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 SLC35C1Q96A29 364 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 DDX50Q9BQ39 737 aaKnown RBP7.81□□□□□ -1.16
HDAC9-202ENST00000405010 ERVK-5Q9HDB9 667 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 STARD13Q9Y3M8 1113 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 SIGLEC1Q9BZZ2 1709 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 CCDC189A1A4V9 331 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 TLR3O15455 904 aaKnown RBP7.81□□□□□ -1.16
HDAC9-202ENST00000405010 CYTH3O43739 400 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 KRT38O76015 456 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 TMCC1O94876 653 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 PSMG1O95456 288 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 POLR2BP30876 1174 aaKnown RBP7.81□□□□□ -1.16
HDAC9-202ENST00000405010 SLC1A1P43005 524 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 PPP2R5DQ14738 602 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 R3HDM1Q15032 1099 aaKnown RBP7.81□□□□□ -1.16
HDAC9-202ENST00000405010 EPHA7Q15375 998 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 CYTH1Q15438 398 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 ASTE1Q2TB18 679 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-202ENST00000405010 SLC44A4Q53GD3 710 aa7.81□□□□□ -1.16
HDAC9-202ENST00000405010 RARS2Q5T160 578 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms