RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 DERAQ9Y315 318 aa31.84■■■□□ 2.69
USP42-202ENST00000404008 TRANK1O15050 2925 aa31.83■■■□□ 2.69
USP42-202ENST00000404008 ZC3H11AO75152 810 aaKnown RBP eCLIP31.83■■■□□ 2.69
USP42-202ENST00000404008 ZBTB6Q15916 424 aa31.83■■■□□ 2.69
USP42-202ENST00000404008 HABP4Q5JVS0 413 aaKnown RBP31.83■■■□□ 2.69
USP42-202ENST00000404008 SPOUT1Q5T280 376 aaKnown RBP31.83■■■□□ 2.69
USP42-202ENST00000404008 COLGALT2Q8IYK4 626 aa31.83■■■□□ 2.69
USP42-202ENST00000404008 KIF12Q96FN5 646 aa31.83■■■□□ 2.69
USP42-202ENST00000404008 FUCA2Q9BTY2 467 aa31.83■■■□□ 2.69
USP42-202ENST00000404008 SLC38A7Q9NVC3 462 aa31.83■■■□□ 2.69
USP42-202ENST00000404008 C2CD2Q9Y426 696 aa31.83■■■□□ 2.69
USP42-202ENST00000404008 NFICP08651 508 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 LAG3P18627 525 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 PSMC2P35998 433 aaKnown RBP31.82■■■□□ 2.69
USP42-202ENST00000404008 TUSC3Q13454 348 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 TMEM132DQ14C87 1099 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 PSMD6Q15008 389 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 C11orf57Q6ZUT1 292 aaPredicted RBP31.82■■■□□ 2.69
USP42-202ENST00000404008 SPRED2Q7Z698 418 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 EFCAB13Q8IY85 973 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 CSGALNACT2Q8N6G5 542 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 C18orf25Q96B23 403 aaPredicted RBP31.82■■■□□ 2.69
USP42-202ENST00000404008 MKNK1Q9BUB5 465 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 RWDD3Q9Y3V2 267 aa31.82■■■□□ 2.69
USP42-202ENST00000404008 CDH23Q9H251 3354 aa31.82■■■□□ 2.68
USP42-202ENST00000404008 CCDC192P0DO97 292 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 BCAR1P56945 870 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 SOX4Q06945 474 aaPredicted RBP31.81■■■□□ 2.68
USP42-202ENST00000404008 SURF1Q15526 300 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 FAM186BQ8IYM0 893 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 COLGALT1Q8NBJ5 622 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 CEP63Q96MT8 703 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 TGS1Q96RS0 853 aaKnown RBP31.81■■■□□ 2.68
USP42-202ENST00000404008 TMEM175Q9BSA9 504 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 C17orf80Q9BSJ5 609 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 SLC16A3O15427 465 aaKnown RBP31.81■■■□□ 2.68
USP42-202ENST00000404008 ERVK-21P61565 698 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 NT5DC4Q86YG4 428 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 GZF1Q9H116 711 aaPredicted RBP31.81■■■□□ 2.68
USP42-202ENST00000404008 DNAJC25Q9H1X3 360 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 AAASQ9NRG9 546 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 TUBGCP4Q9UGJ1 667 aa31.81■■■□□ 2.68
USP42-202ENST00000404008 UBQLN1Q9UMX0 589 aaKnown RBP31.81■■■□□ 2.68
USP42-202ENST00000404008 PBX3P40426 434 aa31.8■■■□□ 2.68
USP42-202ENST00000404008 KCNT2Q6UVM3 1135 aa31.8■■■□□ 2.68
USP42-202ENST00000404008 PLEKHO2Q8TD55 490 aa31.8■■■□□ 2.68
USP42-202ENST00000404008 CCDC127Q96BQ5 260 aa31.8■■■□□ 2.68
USP42-202ENST00000404008 LRCH3Q96II8 777 aa31.8■■■□□ 2.68
USP42-202ENST00000404008 ZNF558Q96NG5 402 aa31.8■■■□□ 2.68
USP42-202ENST00000404008 SAMD11Q96NU1 681 aa31.8■■■□□ 2.68
USP42-202ENST00000404008 GOLGA2P5Q9HBQ8 144 aa31.8■■■□□ 2.68
USP42-202ENST00000404008 GTF3C5Q9Y5Q8 519 aaPredicted RBP31.8■■■□□ 2.68
USP42-202ENST00000404008 PTPRJQ12913 1337 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 TULP1O00294 542 aaPredicted RBP31.79■■■□□ 2.68
USP42-202ENST00000404008 XPOTO43592 962 aaKnown RBP31.79■■■□□ 2.68
USP42-202ENST00000404008 GALTP07902 379 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 EPB41P11171 864 aaKnown RBP31.79■■■□□ 2.68
USP42-202ENST00000404008 CYP3A5P20815 502 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 BMPR1AP36894 532 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 SLC11A1P49279 550 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 ALDH7A1P49419 539 aaKnown RBP31.79■■■□□ 2.68
USP42-202ENST00000404008 INTS8Q75QN2 995 aaKnown RBP31.79■■■□□ 2.68
USP42-202ENST00000404008 FILIP1Q7Z7B0 1213 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 PARD3BQ8TEW8 1205 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 BORCS6Q96GS4 357 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 CACNG4Q9UBN1 327 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 PLXNA4Q9HCM2 1894 aa31.79■■■□□ 2.68
USP42-202ENST00000404008 SZT2Q5T011 3432 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 CASTOR2A6NHX0 329 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 DLATP10515 647 aaKnown RBP31.78■■■□□ 2.68
USP42-202ENST00000404008 CTNNB1P35222 781 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 ANO6Q4KMQ2 910 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 EPC2Q52LR7 807 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 SPATA1Q5VX52 437 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 WDR49Q8IV35 697 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 UROC1Q96N76 676 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 FNBP1Q96RU3 617 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 CGRRF1Q99675 332 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 PAAF1Q9BRP4 392 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 SRRTQ9BXP5 876 aaKnown RBP31.78■■■□□ 2.68
USP42-202ENST00000404008 MTUS1Q9ULD2 1270 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 PCDHB12Q9Y5F1 795 aa31.78■■■□□ 2.68
USP42-202ENST00000404008 TMEM265A0A087WTH1 108 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 CARNS1A5YM72 827 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 C5orf67F2Z3F1 127 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 NRP1O14786 923 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 ALDH2P05091 517 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 OR1G1P47890 313 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 CLDN10P78369 228 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 TFAMQ00059 246 aaKnown RBP31.77■■■□□ 2.68
USP42-202ENST00000404008 BEST2Q8NFU1 509 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 TMC2Q8TDI7 906 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 POP1Q99575 1024 aaKnown RBP31.77■■■□□ 2.68
USP42-202ENST00000404008 PLVAPQ9BX97 442 aa31.77■■■□□ 2.68
USP42-202ENST00000404008 COL4A4P53420 1690 aaPredicted RBP31.76■■■□□ 2.68
USP42-202ENST00000404008 FGFR1OPO95684 399 aaKnown RBP31.76■■■□□ 2.67
USP42-202ENST00000404008 CLCNKBP51801 687 aa31.76■■■□□ 2.67
USP42-202ENST00000404008 MCCD1P59942 119 aaPredicted RBP31.76■■■□□ 2.67
USP42-202ENST00000404008 ENPEPQ07075 957 aa31.76■■■□□ 2.67
USP42-202ENST00000404008 BFSP1Q12934 665 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms