RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 APEX2Q9UBZ4 518 aa27.24■■□□□ 1.95
HIST2H3A-201ENST00000403683 ATP11BQ9Y2G3 1177 aa27.24■■□□□ 1.95
HIST2H3A-201ENST00000403683 COQ4Q9Y3A0 265 aa27.24■■□□□ 1.95
HIST2H3A-201ENST00000403683 IPPQ9Y573 584 aa27.24■■□□□ 1.95
HIST2H3A-201ENST00000403683 PCDHB2Q9Y5E7 798 aa27.24■■□□□ 1.95
HIST2H3A-201ENST00000403683 FHOD1Q9Y613 1164 aa27.24■■□□□ 1.95
HIST2H3A-201ENST00000403683 HLA-DRAP01903 254 aa27.23■■□□□ 1.95
HIST2H3A-201ENST00000403683 TRPC3Q13507 836 aa27.23■■□□□ 1.95
HIST2H3A-201ENST00000403683 ANKRD33Q7Z3H0 272 aa27.23■■□□□ 1.95
HIST2H3A-201ENST00000403683 LMO3Q8TAP4 145 aa27.23■■□□□ 1.95
HIST2H3A-201ENST00000403683 UBE2TQ9NPD8 197 aaPredicted RBP27.23■■□□□ 1.95
HIST2H3A-201ENST00000403683 RECQL4O94761 1208 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 COL6A1P12109 1028 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 TMEM132DQ14C87 1099 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 C15orf39Q6ZRI6 1047 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 TRAPPC11Q7Z392 1133 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 EFCAB13Q8IY85 973 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 NUCKS1Q9H1E3 243 aaKnown RBP27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 PLEKHA5Q9HAU0 1116 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 FAM105AQ9NUU6 356 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 DNAJC12Q9UKB3 198 aa27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 R3HCC1Q9Y3T6 440 aaKnown RBP27.22■■□□□ 1.95
HIST2H3A-201ENST00000403683 LRRC53A6NM62 1247 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 LRRN2O75325 713 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 NFICP08651 508 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 IQCEQ6IPM2 695 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 KIF12Q96FN5 646 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 NT5C1BQ96P26 610 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 DNAJC7Q99615 494 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 PI4K2AQ9BTU6 479 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 IFIH1Q9BYX4 1025 aaKnown RBP27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 IMPG2Q9BZV3 1241 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 CCZ1BP86790 482 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 CCZ1P86791 482 aaPredicted RBP27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 NCOA4Q13772 614 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 PHLDB3Q6NSJ2 640 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 PDXDC1Q6P996 788 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 TRAF7Q6Q0C0 670 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 PPM1KQ8N3J5 372 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 ADAM2Q99965 735 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 HIPK3Q9H422 1215 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 KLK14Q9P0G3 267 aa27.21■■□□□ 1.95
HIST2H3A-201ENST00000403683 KRT19P08727 400 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 ARHGAP44Q17R89 818 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 SFMBT2Q5VUG0 894 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 DPY19L2P1Q6NXN4 242 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 NECAB2Q7Z6G3 386 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 GPIHBP1Q8IV16 184 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 SMG8Q8ND04 991 aaKnown RBP27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 BAP1Q92560 729 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 SNX27Q96L92 541 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 TOX2Q96NM4 488 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 NAA15Q9BXJ9 866 aaKnown RBP27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 RNF39Q9H2S5 420 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 C1orf112Q9NSG2 853 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 FBXL5Q9UKA1 691 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 ZKSCAN5Q9Y2L8 839 aa27.2■■□□□ 1.94
HIST2H3A-201ENST00000403683 PITPNM1O00562 1244 aa27.19■■□□□ 1.94
HIST2H3A-201ENST00000403683 MEFVO15553 781 aaPredicted RBP27.19■■□□□ 1.94
HIST2H3A-201ENST00000403683 ITGA4P13612 1032 aa27.19■■□□□ 1.94
HIST2H3A-201ENST00000403683 FAAP100Q0VG06 881 aa27.19■■□□□ 1.94
HIST2H3A-201ENST00000403683 MBTPS1Q14703 1052 aa27.19■■□□□ 1.94
HIST2H3A-201ENST00000403683 RNF169Q8NCN4 708 aa27.19■■□□□ 1.94
HIST2H3A-201ENST00000403683 TMX1Q9H3N1 280 aa27.19■■□□□ 1.94
HIST2H3A-201ENST00000403683 VNN1O95497 513 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 CAPN2P17655 700 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 RFX1P22670 979 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 MSNP26038 577 aaKnown RBP27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 ARID5AQ03989 594 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 C1orf53Q5VUE5 145 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 CYP26C1Q6V0L0 522 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 ARHGEF19Q8IW93 802 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 ELMO3Q96BJ8 720 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 PPP1R12CQ9BZL4 782 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 C2CD2Q9Y426 696 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 DAAM1Q9Y4D1 1078 aa27.18■■□□□ 1.94
HIST2H3A-201ENST00000403683 MGEA5O60502 916 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 RAB27AP51159 221 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 NT5DC4Q86YG4 428 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 STK33Q9BYT3 514 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 ZC3H11AO75152 810 aaKnown RBP eCLIP27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 CST3P01034 146 aaPredicted RBP27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 MFAP3P55082 362 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 DRAP1Q14919 205 aaPredicted RBP27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 GLRA4Q5JXX5 417 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 ZSCAN30Q86W11 494 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 TMTC1Q8IUR5 882 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 RNF19AQ9NV58 838 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 TMEM39AQ9NV64 488 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 AJAP1Q9UKB5 411 aaPredicted RBP27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 PLAGL2Q9UPG8 496 aa27.17■■□□□ 1.94
HIST2H3A-201ENST00000403683 SKIP12755 728 aa27.16■■□□□ 1.94
HIST2H3A-201ENST00000403683 STAT1P42224 750 aa27.16■■□□□ 1.94
HIST2H3A-201ENST00000403683 CCL23P55773 120 aa27.16■■□□□ 1.94
HIST2H3A-201ENST00000403683 DSC3Q14574 896 aa27.16■■□□□ 1.94
HIST2H3A-201ENST00000403683 ASIC2Q16515 512 aa27.16■■□□□ 1.94
HIST2H3A-201ENST00000403683 TATDN2Q93075 761 aa27.16■■□□□ 1.94
HIST2H3A-201ENST00000403683 DPP3Q9NY33 737 aa27.16■■□□□ 1.94
HIST2H3A-201ENST00000403683 PYCARDQ9ULZ3 195 aa27.16■■□□□ 1.94
HIST2H3A-201ENST00000403683 DERAQ9Y315 318 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms