RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SNTG2Q9NY99 539 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 MTRRQ9UBK8 725 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 MRPS23Q9Y3D9 190 aaKnown RBP13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ITPR1Q14643 2758 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 I3L4J1 428 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 XYLBO75191 536 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 MOSPD3O75425 235 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 BMP2KLQ5H9B9 411 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PPP4R3AQ6IN85 833 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 MAP4K3Q8IVH8 894 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 EXOC8Q8IYI6 725 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 C3orf58Q8NDZ4 430 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 NELL2Q99435 816 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 HSD17B14Q9BPX1 270 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 NFKBIZQ9BYH8 718 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 TRIM6Q9C030 488 aaPredicted RBP13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 SLKQ9H2G2 1235 aaPredicted RBP13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PDZD7Q9H5P4 517 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ZSWIM4Q9H7M6 989 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 SEMA4GQ9NTN9 838 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 GMEB2Q9UKD1 530 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ATG2BQ96BY7 2078 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 WNT7AO00755 349 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 RECQL4O94761 1208 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 RETP07949 1114 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 CHRNB1P11230 501 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 TKTP29401 623 aaKnown RBP13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 HSPA4P34932 840 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 LAIR1Q6GTX8 287 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 TPH2Q8IWU9 490 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 NETO1Q8TDF5 533 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 BSNDQ8WZ55 320 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 SECISBP2LQ93073 1101 aaKnown RBP13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 FAM126AQ9BYI3 521 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 POLR3FQ9H1D9 316 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 FZD8Q9H461 694 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 LMAN1LQ9HAT1 526 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 AVENQ9NQS1 362 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 RXFP3Q9NSD7 469 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 GDE1Q9NZC3 331 aa13.18□□□□□ -0.3
SPTLC1P3-201ENST00000403408 CHURC1-FNTBB4DL54 471 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 K7ESF4 209 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ARNTLO00327 626 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 TM4SF5O14894 197 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 DKC1O60832 514 aaKnown RBP eCLIP13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 LYPLA2O95372 231 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 SEC24AO95486 1093 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 HOXB3P14651 431 aaPredicted RBP13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PMLP29590 882 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 BRCC3P46736 316 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 FNTBP49356 437 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 RARRES1P49788 294 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 VITQ6UXI7 678 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PRR23BQ6ZRT6 265 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 OTUD6AQ7L8S5 288 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 KRT25Q7Z3Z0 450 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 NOSTRINQ8IVI9 506 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 CELF5Q8N6W0 485 aaKnown RBP13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 DNASE1L2Q92874 299 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 RSPRY1Q96DX4 576 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 EIF2AK1Q9BQI3 630 aaKnown RBP13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 GOLGA2P5Q9HBQ8 144 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 GREB1Q4ZG55 1949 aa13.17□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ARHGEF37A1IGU5 675 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 WDR27A2RRH5 827 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 TBX3O15119 743 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 NCAM2O15394 837 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 CCNT1O60563 726 aaKnown RBP13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 DEXIO95424 95 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 THP07101 528 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 VIPR2P41587 438 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 CLCNKBP51801 687 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ROR1Q01973 937 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 SOX4Q06945 474 aaPredicted RBP13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 TFDP1Q14186 410 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 GLRA4Q5JXX5 417 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 N4BP2L1Q5TBK1 243 aaPredicted RBP13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 Q6ZS52 159 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PIGOQ8TEQ8 1089 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms