RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 IGFLR1Q9H665 355 aa20.93■□□□□ 0.94
RTN4-207ENST00000402434 AGO2Q9UKV8 859 aaKnown RBP20.93■□□□□ 0.94
RTN4-207ENST00000402434 TMEM189-UBE2V1I3L0A0 370 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 PER2O15055 1255 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 LILRB3O75022 631 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 SOX4Q06945 474 aaPredicted RBP20.92■□□□□ 0.94
RTN4-207ENST00000402434 KCNC3Q14003 757 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 UPP1Q16831 310 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 FUT10Q6P4F1 479 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 TAS1R1Q7RTX1 841 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 FMR1NBQ8N0W7 255 aaPredicted RBP20.92■□□□□ 0.94
RTN4-207ENST00000402434 TSPAN18Q96SJ8 248 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 GPR62Q9BZJ7 368 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 RPF1Q9H9Y2 349 aaKnown RBP20.92■□□□□ 0.94
RTN4-207ENST00000402434 CHST7Q9NS84 486 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 CLDND1Q9NY35 253 aa20.92■□□□□ 0.94
RTN4-207ENST00000402434 LACTBL1A8MY62 500 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 LINC01565O15544 149 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 TADA2AO75478 443 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 KIF4AO95239 1232 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 GARTP22102 1010 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 CLCNKBP51801 687 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 PTPN14Q15678 1187 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 ZBTB6Q15916 424 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 DCLRE1AQ6PJP8 1040 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 CRELD2Q6UXH1 353 aaPredicted RBP20.91■□□□□ 0.94
RTN4-207ENST00000402434 CD302Q8IX05 232 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 GPR65Q8IYL9 337 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 ENGASEQ8NFI3 743 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 AUTS2Q8WXX7 1259 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 DDX27Q96GQ7 796 aaKnown RBP20.91■□□□□ 0.94
RTN4-207ENST00000402434 HERC2P3Q9BVR0 1158 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 GOLGA2P5Q9HBQ8 144 aa20.91■□□□□ 0.94
RTN4-207ENST00000402434 KCNA5P22460 613 aa20.9■□□□□ 0.94
RTN4-207ENST00000402434 ACOT2P49753 483 aa20.9■□□□□ 0.94
RTN4-207ENST00000402434 PSMD2Q13200 908 aa20.9■□□□□ 0.94
RTN4-207ENST00000402434 SNW1Q13573 536 aaKnown RBP20.9■□□□□ 0.94
RTN4-207ENST00000402434 KIAA0319Q5VV43 1072 aa20.9■□□□□ 0.94
RTN4-207ENST00000402434 TMEM184AQ6ZMB5 413 aa20.9■□□□□ 0.94
RTN4-207ENST00000402434 SCFD1Q8WVM8 642 aa20.9■□□□□ 0.94
RTN4-207ENST00000402434 C18orf25Q96B23 403 aaPredicted RBP20.9■□□□□ 0.94
RTN4-207ENST00000402434 SLC39A2Q9NP94 309 aa20.9■□□□□ 0.94
RTN4-207ENST00000402434 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.9■□□□□ 0.94
RTN4-207ENST00000402434 SF3B1O75533 1304 aaKnown RBP eCLIP20.89■□□□□ 0.942e-6■■■■■ 75.3
RTN4-207ENST00000402434 UBE4BO95155 1302 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.89■□□□□ 0.94
RTN4-207ENST00000402434 B3GAT3O94766 335 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 GLP2RO95838 553 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 IGFBP6P24592 240 aaPredicted RBP20.89■□□□□ 0.94
RTN4-207ENST00000402434 RPL9P32969 192 aaKnown RBP20.89■□□□□ 0.94
RTN4-207ENST00000402434 DSG1Q02413 1049 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 PPP2R3AQ06190 1150 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 DLX2Q07687 328 aaPredicted RBP20.89■□□□□ 0.94
RTN4-207ENST00000402434 DPYDQ12882 1025 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 BMT2Q1RMZ1 405 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 USP41Q3LFD5 358 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 LEXMQ3ZCV2 418 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 KMT5BQ4FZB7 885 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 KANK3Q6NY19 840 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 CD300LGQ6UXG3 332 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 MRPL17Q9NRX2 175 aaKnown RBP20.89■□□□□ 0.94
RTN4-207ENST00000402434 SSX2IPQ9Y2D8 614 aa20.89■□□□□ 0.94
RTN4-207ENST00000402434 PDCD11Q14690 1871 aaKnown RBP20.88■□□□□ 0.93
RTN4-207ENST00000402434 TBX10O75333 385 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 LDHAP00338 332 aaKnown RBP20.88■□□□□ 0.93
RTN4-207ENST00000402434 URODP06132 367 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 PRR29P0C7W0 189 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 CYP3A5P20815 502 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 GLUD2P49448 558 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 FAM160A1Q05DH4 1040 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 STK4Q13043 487 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 VN1R2Q8NFZ6 395 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 HASPINQ8TF76 798 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 CBWD1Q9BRT8 395 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 ASB7Q9H672 318 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 EXOC1Q9NV70 894 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 CLEC1BQ9P126 229 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 KIAA0391O15091 583 aaKnown RBP20.88■□□□□ 0.93
RTN4-207ENST00000402434 TGFB1I1O43294 461 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 CLASP2O75122 1294 aaKnown RBP20.88■□□□□ 0.93
RTN4-207ENST00000402434 RPN1P04843 607 aaKnown RBP20.88■□□□□ 0.93
RTN4-207ENST00000402434 BMP1P13497 986 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 SPAG1Q07617 926 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 ELAVL2Q12926 359 aaKnown RBP20.88■□□□□ 0.93
RTN4-207ENST00000402434 TJAP1Q5JTD0 557 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 EP400NLQ6ZTU2 488 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 TMEM87AQ8NBN3 555 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 C3orf58Q8NDZ4 430 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 KIF12Q96FN5 646 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 CCDC34Q96HJ3 373 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 MSLNLQ96KJ4 702 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 UBQLN1Q9UMX0 589 aaKnown RBP20.88■□□□□ 0.93
RTN4-207ENST00000402434 DERAQ9Y315 318 aa20.88■□□□□ 0.93
RTN4-207ENST00000402434 H3BQ06 376 aaPredicted RBP20.87■□□□□ 0.93
RTN4-207ENST00000402434 PODXLO00592 558 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 CNPP09543 421 aaKnown RBP20.87■□□□□ 0.93
RTN4-207ENST00000402434 LRPAP1P30533 357 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 KCNQ1P51787 676 aa20.87■□□□□ 0.93
RTN4-207ENST00000402434 SNRPFP62306 86 aaKnown RBP20.87■□□□□ 0.93
RTN4-207ENST00000402434 RBM10P98175 930 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms