RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 SPATA18Q8TC71 538 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 N4BP2L2Q92802 583 aaPredicted RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 CYFIP2Q96F07 1278 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 IFT43Q96FT9 208 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 RBM41Q96IZ5 413 aaKnown RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 ZNF512BQ96KM6 892 aaPredicted RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 GCNAQ96QF7 691 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 CRAMP1Q96RY5 1269 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 CELF4Q9BZC1 486 aaKnown RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 DEFB129Q9H1M3 183 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 TXLNGQ9NUQ3 528 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 HSPBP1Q9NZL4 362 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 PPARGC1AQ9UBK2 798 aaKnown RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 ZNRF3Q9ULT6 936 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 GREB1Q4ZG55 1949 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 AGLP35573 1532 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 KIF13BQ9NQT8 1826 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 KDM6AO15550 1401 aaPredicted RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 A0A1W2PQC6 194 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 COPEO14579 308 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 MAP3K6O95382 1288 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 TXNP10599 105 aaKnown RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 TAL1P17542 331 aaPredicted RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 HOXA7P31268 230 aaPredicted RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 RFC1P35251 1148 aaPredicted RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 GRIK1P39086 918 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 GALCP54803 685 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 CCZ1BP86790 482 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 CCZ1P86791 482 aaPredicted RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 NSUN2Q08J23 767 aaKnown RBP eCLIP3.45□□□□□ -1.86
KNL1-202ENST00000399668 TROAPQ12815 778 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 ORC2Q13416 577 aaPredicted RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 SBK1Q52WX2 424 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 HEATR6Q6AI08 1181 aaKnown RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 PPP1R18Q6NYC8 613 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 TRIM67Q6ZTA4 783 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 ZGRF1Q86YA3 2104 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 TC2NQ8N9U0 490 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 PRPF31Q8WWY3 499 aaKnown RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 TGS1Q96RS0 853 aaKnown RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 AGPAT1Q99943 283 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 TRAIPQ9BWF2 469 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 ELP3Q9H9T3 547 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 IRAK4Q9NWZ3 460 aa3.45□□□□□ -1.86
KNL1-202ENST00000399668 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.45□□□□□ -1.86
KNL1-202ENST00000399668 SCN5AQ14524 2016 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 SPECC1L-ADORA2AF8WAN1 911 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 WDR46O15213 610 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 ZBTB24O43167 697 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 SMIM24O75264 130 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 S100BP04271 92 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 BRAFP15056 766 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ADORA2BP29275 332 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 RFX5P48382 616 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 CASP4P49662 377 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PPP2R2AP63151 447 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 R3HDM1Q15032 1099 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 DCAF6Q58WW2 860 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ATG16L1Q676U5 607 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 EFCAB12Q6NXP0 572 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TRMT10CQ7L0Y3 403 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 FASTKD5Q7L8L6 764 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 TRIM42Q8IWZ5 723 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 RHOT1Q8IXI2 618 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 MICALL2Q8IY33 904 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 RAPGEF5Q92565 580 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 LPAR1Q92633 364 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 HVCN1Q96D96 273 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 C2orf40Q9H1Z8 148 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 GPRC5CQ9NQ84 441 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 FAM8A1Q9UBU6 413 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PIN4Q9Y237 131 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 ORC6Q9Y5N6 252 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 COL3A1P02461 1466 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 GOLGA8QA0A0J9YX86 632 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 CCDC78A2IDD5 438 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 GOLGA8OA6NCC3 632 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 GOLGA8NF8WBI6 632 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ATP9BO43861 1147 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 RHOBTB3O94955 611 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 NTSR2O95665 410 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 FDPSP14324 419 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 NT5C2P49902 561 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 CDR2Q01850 454 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ROR1Q01973 937 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 MXD4Q14582 209 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 GRAMD1BQ3KR37 738 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 ACCSLQ4AC99 568 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 EPC2Q52LR7 807 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 SEZ6Q53EL9 994 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 SLC10A5Q5PT55 438 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PPP1R2P3Q6NXS1 205 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 RFFLQ8WZ73 363 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 PRMT6Q96LA8 375 aaPredicted RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 TTC25Q96NG3 672 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 POP1Q99575 1024 aaKnown RBP3.44□□□□□ -1.86
KNL1-202ENST00000399668 ZBED2Q9BTP6 218 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TEX13BQ9BXU2 312 aa3.44□□□□□ -1.86
KNL1-202ENST00000399668 TMEM117Q9H0C3 514 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms