RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 CTNNB1P35222 781 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 EFHC1Q5JVL4 640 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 MFN1Q8IWA4 741 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 FIBCD1Q8N539 461 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 LRRC8CQ8TDW0 803 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 ANGPTL8Q6UXH0 198 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 LRRC71Q8N4P6 559 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 ZNF557Q8N988 423 aaPredicted RBP8.41□□□□□ -1.06
USP47-203ENST00000399455 FAM129AQ9BZQ8 928 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.41□□□□□ -1.06
USP47-203ENST00000399455 ZMYM2Q9UBW7 1377 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 ARHGAP42A6NI28 874 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 TTC36A6NLP5 189 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 F5H5T6 163 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 GARTP22102 1010 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 ZBED6P86452 979 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 WDR72Q3MJ13 1102 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 MGARPQ8TDB4 240 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 FBXO32Q969P5 355 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 ACSF2Q96CM8 615 aaPredicted RBP8.41□□□□□ -1.06
USP47-203ENST00000399455 WNK4Q96J92 1243 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 TRIM15Q9C019 465 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 KDM4CQ9H3R0 1056 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 KCNH7Q9NS40 1196 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 POC1B-GALNT4F8VUJ3 575 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 WNT10BO00744 389 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 PPFIA2O75334 1257 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 VIL1P09327 827 aaKnown RBP8.41□□□□□ -1.06
USP47-203ENST00000399455 GRIK4Q16099 956 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 SMYD4Q8IYR2 804 aaPredicted RBP8.41□□□□□ -1.06
USP47-203ENST00000399455 EXT2Q93063 718 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 CINPQ9BW66 212 aaPredicted RBP8.41□□□□□ -1.06
USP47-203ENST00000399455 TMEM51Q9NW97 253 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 RNF14Q9UBS8 474 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 PYGLP06737 847 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 PRR29P0C7W0 189 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 NCOA4Q13772 614 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 PDIK1LQ8N165 341 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 FAM71BQ8TC56 605 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 VCX3AQ9NNX9 186 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 MAN1C1Q9NR34 630 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 NAGPAQ9UK23 515 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 PCDHA5Q9Y5H7 936 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 HEY1Q9Y5J3 304 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 MYMKA6NI61 221 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 FGF19O95750 216 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 VGLL4Q14135 290 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 GOLGA7BQ2TAP0 167 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 METTL7BQ6UX53 244 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 C1QTNF7Q9BXJ2 289 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 AFF4Q9UHB7 1163 aaKnown RBP8.41□□□□□ -1.06
USP47-203ENST00000399455 DISP2A7MBM2 1401 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 CFAP69A5D8W1 941 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 EFCAB8A8MWE9 144 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 SEC24BO95487 1268 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 ZNF286BP0CG31 522 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 NAMPTP43490 491 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 OSCP1Q8WVF1 389 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 NHEJ1Q9H9Q4 299 aaPredicted RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 EPS15L1Q9UBC2 864 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 PLA2G4CQ9UP65 541 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 EEF2KO00418 725 aaKnown RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 PDXKO00764 312 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 TLL1O43897 1013 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 SMIM24O75264 130 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 PARNO95453 639 aaKnown RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 PDGFRBP09619 1106 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 HIST1H2AGP0C0S8 130 aaPredicted RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 HIST1H2ADP20671 130 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 CDC25AP30304 524 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 IL9RQ01113 521 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 GIPC2Q8TF65 315 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 HIST1H2AHQ96KK5 128 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 CAPNS2Q96L46 248 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 UROC1Q96N76 676 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 HIST1H2AJQ99878 128 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 H2AFJQ9BTM1 129 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 JMJD4Q9H9V9 463 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 MRPL17Q9NRX2 175 aaKnown RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 PCDHA13Q9Y5I0 950 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 MIF4GDA9UHW6 222 aaKnown RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 ADCY6O43306 1168 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 CEP68Q76N32 757 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 ANKRD23Q86SG2 305 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 ILDR1Q86SU0 546 aaPredicted RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 ZNF410Q86VK4 478 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 CHSY1Q86X52 802 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 RASEFQ8IZ41 740 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.4□□□□□ -1.06
USP47-203ENST00000399455 CCDC124Q96CT7 223 aaKnown RBP8.4□□□□□ -1.06
USP47-203ENST00000399455 HPDLQ96IR7 371 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 COG4Q9H9E3 785 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 RIC1Q4ADV7 1423 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 GOLGA8KD6RF30 607 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 GOLGA8MH3BSY2 632 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 GNGT2O14610 69 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 DYRK3O43781 588 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 MT-ND3P03897 115 aa8.4□□□□□ -1.06
USP47-203ENST00000399455 CASP14P31944 242 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms