RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 STRN3Q13033 797 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 C6orf118Q5T5N4 469 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 MICALL1Q8N3F8 863 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 CYFIP2Q96F07 1278 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 FNBP1Q96RU3 617 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 ACAD9Q9H845 621 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 CYP39A1Q9NYL5 469 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 ANAPC7Q9UJX3 599 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 CAND2O75155 1236 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 SUPT20HL2P0C7V6 817 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 RARGP13631 454 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 TMOD1P28289 359 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 MAN1A1P33908 653 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 SUPT20HL1Q3ZLR7 823 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 SYDE1Q6ZW31 735 aaPredicted RBP24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 CPNE8Q86YQ8 564 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 MICALL2Q8IY33 904 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 ZNF516Q92618 1163 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 PI4K2AQ9BTU6 479 aa24.69■■□□□ 1.54
RABGGTA-202ENST00000399409 RLFQ13129 1914 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 KIAA1217Q5T5P2 1943 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 SHBGP04278 402 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 ZACNQ401N2 412 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 TEX13BQ9BXU2 312 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 STMN4Q9H169 189 aaPredicted RBP24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 ZNFX1Q9P2E3 1918 aaKnown RBP24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 DCDC2CA8MYV0 355 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 LIG3P49916 1009 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 CALCOCO2Q13137 446 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 SLC29A2Q14542 456 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 EMC2Q15006 297 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 SLFN12LQ6IEE8 588 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 TRIM72Q6ZMU5 477 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 RAPGEF5Q92565 580 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 WHRNQ9P202 907 aa24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.68■■□□□ 1.54
RABGGTA-202ENST00000399409 COL11A1P12107 1806 aaPredicted RBP24.67■■□□□ 1.54
RABGGTA-202ENST00000399409 MYPNQ86TC9 1320 aa24.67■■□□□ 1.54
RABGGTA-202ENST00000399409 PIGRP01833 764 aa24.67■■□□□ 1.54
RABGGTA-202ENST00000399409 GMPSP49915 693 aaPredicted RBP24.67■■□□□ 1.54
RABGGTA-202ENST00000399409 TMEM132BQ14DG7 1078 aa24.67■■□□□ 1.54
RABGGTA-202ENST00000399409 PPP1R7Q15435 360 aa24.67■■□□□ 1.54
RABGGTA-202ENST00000399409 C5orf60A6NFR6 353 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 AGTP01019 485 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 HLA-DRAP01903 254 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 C4BPAP04003 597 aaKnown RBP24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 PTP4A2Q12974 167 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 MTERF2Q49AM1 385 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 SGO2Q562F6 1265 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 PPP1R2P3Q6NXS1 205 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 SAMD7Q7Z3H4 446 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 PACS2Q86VP3 889 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 SEMA4AQ9H3S1 761 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 AGO2Q9UKV8 859 aaKnown RBP24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 RGS16O15492 202 aaPredicted RBP24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 CLDN3O15551 220 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 CYP1A1P04798 512 aaPredicted RBP24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 TNNI1P19237 187 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 NSFP46459 744 aaKnown RBP24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 POLGP54098 1239 aaPredicted RBP24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 HMGCS2P54868 508 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 CENPCQ03188 943 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 TRMT10CQ7L0Y3 403 aaKnown RBP24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 WRNIP1Q96S55 665 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 CEP89Q96ST8 783 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 LRRC4CQ9HCJ2 640 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 A1CFQ9NQ94 594 aaKnown RBP24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 PTPN22Q9Y2R2 807 aa24.66■■□□□ 1.54
RABGGTA-202ENST00000399409 LDHAP00338 332 aaKnown RBP24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 PIK3CAP42336 1068 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 LIN9Q5TKA1 542 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 MROH7Q68CQ1 1323 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 RIPK2O43353 540 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 POTEJP0CG39 1038 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 NAMPTP43490 491 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 SP4Q02446 784 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 DRP2Q13474 957 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 C6orf89Q6UWU4 347 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 CATSPERGQ6ZRH7 1159 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 GRK7Q8WTQ7 553 aa24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 ZKSCAN4Q969J2 545 aaPredicted RBP24.65■■□□□ 1.54
RABGGTA-202ENST00000399409 FSBPO95073 299 aa24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 ITIH2P19823 946 aa24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 ICAM3P32942 547 aa24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 MMP13P45452 471 aa24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 KCNJ1P48048 391 aa24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 ERMARDQ5T6L9 678 aa24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 ROPN1BQ9BZX4 212 aaPredicted RBP24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 PORCNQ9H237 461 aa24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 ROPN1Q9HAT0 212 aaPredicted RBP24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 MAFBQ9Y5Q3 323 aaPredicted RBP24.64■■□□□ 1.54
RABGGTA-202ENST00000399409 ATG7O95352 703 aa24.64■■□□□ 1.53
RABGGTA-202ENST00000399409 RRM1P23921 792 aa24.64■■□□□ 1.53
RABGGTA-202ENST00000399409 TDRD10Q5VZ19 366 aaKnown RBP24.64■■□□□ 1.53
RABGGTA-202ENST00000399409 ELMO3Q96BJ8 720 aa24.64■■□□□ 1.53
RABGGTA-202ENST00000399409 VCPIP1Q96JH7 1222 aa24.64■■□□□ 1.53
RABGGTA-202ENST00000399409 XPO6Q96QU8 1125 aaKnown RBP24.64■■□□□ 1.53
RABGGTA-202ENST00000399409 ZNF302Q9NR11 478 aa24.64■■□□□ 1.53
RABGGTA-202ENST00000399409 HOMER3Q9NSC5 361 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms