RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ASB14A6NK59 587 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CNMDO75829 334 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 RWDD2BP57060 319 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 NLRP11P59045 1033 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CAPSQ13938 189 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TFDP1Q14186 410 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CYP1B1Q16678 543 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 DPY19L2Q6NUT2 758 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 WDR49Q8IV35 697 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 BRSK2Q8IWQ3 736 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TSEN2Q8NCE0 465 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 OTUD5Q96G74 571 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 L3MBTL3Q96JM7 780 aaPredicted RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ELP3Q9H9T3 547 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 AMACRQ9UHK6 382 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 NOP56O00567 594 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PHF2O75151 1096 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CYP1A1P04798 512 aaPredicted RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MRPS25P82663 173 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 DR1Q01658 176 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CENPCQ03188 943 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 POU5F1BQ06416 359 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 FSTL1Q12841 308 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 BIRC3Q13489 604 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CUL2Q13617 745 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MESDQ14696 234 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 LIN9Q5TKA1 542 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TDRD10Q5VZ19 366 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ARMC9Q7Z3E5 817 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PRPF31Q8WWY3 499 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ALG3Q92685 438 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ZIM3Q96PE6 472 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GPR20Q99678 358 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ERP44Q9BS26 406 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TARS2Q9BW92 718 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SMARCAD1Q9H4L7 1026 aa18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MRPL47Q9HD33 250 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CNOT8Q9UFF9 292 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.97■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CNTNAP2Q9UHC6 1331 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ESYT3A0FGR9 886 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ADM5C9JUS6 153 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SPOPO43791 374 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SHOX2O60902 331 aaPredicted RBP18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ITGA4P13612 1032 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ACOT2P49753 483 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GYS2P54840 703 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PTP4A2Q12974 167 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MAPK6Q16659 721 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MCOLN2Q8IZK6 566 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GLG1Q92896 1179 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MMP19Q99542 508 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CCDC113Q9H0I3 377 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 RBPJLQ9UBG7 517 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 OTOFQ9HC10 1997 aa18.96■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ZSCAN5CA6NGD5 496 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 GOLGA6L10A6NI86 522 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 HMGB1P1B2RPK0 211 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 OGTO15294 1046 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 HBP1O60381 514 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 MSCO60682 206 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 FAM153BP0C7A2 387 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 ACO1P21399 889 aaKnown RBP18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 ECHS1P30084 290 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 NSFP46459 744 aaKnown RBP18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 FAM153CQ494X1 144 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 RUFY4Q6ZNE9 571 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 CDCA5Q96FF9 252 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 HINFPQ9BQA5 517 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 PAGR1Q9BTK6 254 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 NFKBIZQ9BYH8 718 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 RNF181Q9P0P0 153 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 FAM153AQ9UHL3 310 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 FEZ2Q9UHY8 353 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 PNMA3Q9UL41 463 aa18.95■□□□□ 0.62
HLA-DQB1-204ENST00000399084 VNN1O95497 513 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 CLTAP09496 248 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 YY1P25490 414 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 MAN1A1P33908 653 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 FNTAP49354 379 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 SKOR1P84550 965 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 MCL1Q07820 350 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 DUPD1Q68J44 220 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 CCDC62Q6P9F0 684 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 CROCCP2Q86T23 111 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 PHF13Q86YI8 300 aaPredicted RBP18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 DHX37Q8IY37 1157 aaKnown RBP18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 ABRAQ8N0Z2 381 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 C12orf50Q8NA57 414 aaPredicted RBP18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 HOMER3Q9NSC5 361 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 TTI1O43156 1089 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 MAPK4P31152 587 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 EIF3BP55884 814 aaKnown RBP18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 LAMTOR4Q0VGL1 99 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 TTLL4Q14679 1199 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 ZSCAN26Q16670 478 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 SGSM1Q2NKQ1 1148 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 SLCO2A1Q92959 643 aa18.94■□□□□ 0.62
HLA-DQB1-204ENST00000399084 ACO2Q99798 780 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms