RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 TAAR1Q96RJ0 339 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 ZNF341Q9BYN7 854 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 HOMER2Q9NSB8 354 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 DENND3A2RUS2 1198 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 CHUKO15111 745 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 DNAJC8O75937 253 aaPredicted RBP27.33■■□□□ 1.97
COL13A1-203ENST00000398969 JAK3P52333 1124 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 DMP1Q13316 513 aaPredicted RBP27.33■■□□□ 1.97
COL13A1-203ENST00000398969 SLC39A4Q6P5W5 647 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 EXOC3L1Q86VI1 746 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 SGSM3Q96HU1 749 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 FBXL18Q96ME1 805 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 CCDC113Q9H0I3 377 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 YY1AP1Q9H869 796 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 HACL1Q9UJ83 578 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 ANAPC7Q9UJX3 599 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 SNX1Q13596 522 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 PGM5Q15124 567 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 RHBDF2Q6PJF5 856 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 SV2AQ7L0J3 742 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 WDR64B1ANS9 1081 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 MAPK4P31152 587 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 GTF2H1P32780 548 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 IFNAR2P48551 515 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 LONRF1Q17RB8 773 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 RAVER2Q9HCJ3 691 aaKnown RBP27.32■■□□□ 1.96
COL13A1-203ENST00000398969 CHST7Q9NS84 486 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 SAMD15Q9P1V8 674 aa27.32■■□□□ 1.96
COL13A1-203ENST00000398969 CALCAP01258 141 aa27.31■■□□□ 1.96
COL13A1-203ENST00000398969 KRT5P13647 590 aa27.31■■□□□ 1.96
COL13A1-203ENST00000398969 CYP24A1Q07973 514 aa27.31■■□□□ 1.96
COL13A1-203ENST00000398969 PARP9Q8IXQ6 854 aa27.31■■□□□ 1.96
COL13A1-203ENST00000398969 KMT5AQ9NQR1 393 aa27.31■■□□□ 1.96
COL13A1-203ENST00000398969 ASIC3Q9UHC3 531 aa27.31■■□□□ 1.96
COL13A1-203ENST00000398969 ACSL3O95573 720 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 VIMP08670 466 aaKnown RBP27.3■■□□□ 1.96
COL13A1-203ENST00000398969 MYCLP12524 364 aaPredicted RBP27.3■■□□□ 1.96
COL13A1-203ENST00000398969 ITIH2P19823 946 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 ANO5Q75V66 913 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 BSNDQ8WZ55 320 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 ZKSCAN4Q969J2 545 aaPredicted RBP27.3■■□□□ 1.96
COL13A1-203ENST00000398969 ELAC2Q9BQ52 826 aaKnown RBP27.3■■□□□ 1.96
COL13A1-203ENST00000398969 TCEAL9Q9UHQ7 104 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 ZNF541Q9H0D2 1346 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 UNGP13051 313 aaPredicted RBP27.3■■□□□ 1.96
COL13A1-203ENST00000398969 SFNP31947 248 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 CHKAP35790 457 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 RPS6P62753 249 aaKnown RBP27.3■■□□□ 1.96
COL13A1-203ENST00000398969 CCDC91Q7Z6B0 441 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 ATG4AQ8WYN0 398 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 TRIM7Q9C029 511 aa27.3■■□□□ 1.96
COL13A1-203ENST00000398969 MROH7Q68CQ1 1323 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 GCNT1Q02742 428 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 SF3A3Q12874 501 aaKnown RBP eCLIP27.29■■□□□ 1.96
COL13A1-203ENST00000398969 USP37Q86T82 979 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 POMGNT1Q8WZA1 660 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 UPF1Q92900 1129 aaKnown RBP eCLIP27.29■■□□□ 1.96
COL13A1-203ENST00000398969 SNF8Q96H20 258 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 HERPUD2Q9BSE4 406 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 PI4K2AQ9BTU6 479 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 WDR46O15213 610 aaKnown RBP27.29■■□□□ 1.96
COL13A1-203ENST00000398969 SCP2P22307 547 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 IVDP26440 423 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 KRT76Q01546 638 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 PTK6Q13882 451 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 SNCBQ16143 134 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 MCOLN2Q8IZK6 566 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 PLCD3Q8N3E9 789 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 SERPINB12Q96P63 405 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 NSRP1Q9H0G5 558 aaKnown RBP27.29■■□□□ 1.96
COL13A1-203ENST00000398969 HOMER3Q9NSC5 361 aa27.29■■□□□ 1.96
COL13A1-203ENST00000398969 MAP3K20Q9NYL2 800 aaKnown RBP27.29■■□□□ 1.96
COL13A1-203ENST00000398969 SYDE1Q6ZW31 735 aaPredicted RBP27.28■■□□□ 1.96
COL13A1-203ENST00000398969 SPIRE2Q8WWL2 714 aa27.28■■□□□ 1.96
COL13A1-203ENST00000398969 NTPCRQ9BSD7 190 aaKnown RBP27.28■■□□□ 1.96
COL13A1-203ENST00000398969 SLC38A10Q9HBR0 1119 aa27.28■■□□□ 1.96
COL13A1-203ENST00000398969 AVENQ9NQS1 362 aaPredicted RBP27.28■■□□□ 1.96
COL13A1-203ENST00000398969 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.28■■□□□ 1.96
COL13A1-203ENST00000398969 SLC12A4Q9UP95 1085 aa27.28■■□□□ 1.96
COL13A1-203ENST00000398969 ENOSF1Q7L5Y1 443 aa27.28■■□□□ 1.96
COL13A1-203ENST00000398969 MAIP1Q8WWC4 291 aa27.28■■□□□ 1.96
COL13A1-203ENST00000398969 ARHGEF2Q92974 986 aaKnown RBP27.28■■□□□ 1.96
COL13A1-203ENST00000398969 MAN1A1P33908 653 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 SOX10P56693 466 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 OTUD6AQ7L8S5 288 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 GSTA1P08263 222 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 RRM1P23921 792 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 NBPF12Q5TAG4 269 aaPredicted RBP27.27■■□□□ 1.96
COL13A1-203ENST00000398969 GPD1LQ8N335 351 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 FAM81BQ96LP2 452 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 PDCD2LQ9BRP1 358 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 DCLK3Q9C098 648 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 GINM1Q9NU53 330 aa27.27■■□□□ 1.96
COL13A1-203ENST00000398969 MYPNQ86TC9 1320 aa27.26■■□□□ 1.95
COL13A1-203ENST00000398969 TTC4O95801 387 aa27.26■■□□□ 1.95
COL13A1-203ENST00000398969 SLC1A1P43005 524 aa27.26■■□□□ 1.95
COL13A1-203ENST00000398969 ITGA8P53708 1063 aa27.26■■□□□ 1.95
COL13A1-203ENST00000398969 CCDC50Q8IVM0 306 aa27.26■■□□□ 1.95
COL13A1-203ENST00000398969 DDX27Q96GQ7 796 aaKnown RBP27.26■■□□□ 1.95
COL13A1-203ENST00000398969 FAM84AQ96KN4 292 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms