RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 SNCBQ16143 134 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 FSCN1Q16658 493 aaKnown RBP14.12□□□□□ -0.15
TOP3B-202ENST00000398793 XRRA1Q6P2D8 792 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 WDR59Q6PJI9 974 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 KIFAP3Q92845 792 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 JAKMIP2Q96AA8 810 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 MTMR12Q9C0I1 747 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 LACRTQ9GZZ8 138 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 RBAKQ9NYW8 714 aaPredicted RBP14.12□□□□□ -0.15
TOP3B-202ENST00000398793 DBR1Q9UK59 544 aaKnown RBP14.12□□□□□ -0.15
TOP3B-202ENST00000398793 PON1P27169 355 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 MXI1P50539 228 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 FCGRTP55899 365 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 BFSP1Q12934 665 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 KIF22Q14807 665 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 DUSP28Q4G0W2 176 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 CATSPER4Q7RTX7 472 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 NEK9Q8TD19 979 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 SEMA4DQ92854 862 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 C16orf70Q9BSU1 422 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 MORF4L1Q9UBU8 362 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 DNAJC12Q9UKB3 198 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.11□□□□□ -0.15
TOP3B-202ENST00000398793 GRIN2DO15399 1336 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 ADCY3O60266 1144 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 ZMYND10O75800 440 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 WEE2P0C1S8 567 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 FMO5P49326 533 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 TUBB4BP68371 445 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 PRPF4BQ13523 1007 aaKnown RBP14.11□□□□□ -0.15
TOP3B-202ENST00000398793 CCDC122Q5T0U0 273 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 CNGA4Q8IV77 575 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 GSPT2Q8IYD1 628 aaKnown RBP14.11□□□□□ -0.15
TOP3B-202ENST00000398793 ZNF296Q8WUU4 475 aaPredicted RBP14.11□□□□□ -0.15
TOP3B-202ENST00000398793 BEGAINQ9BUH8 593 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 HAUS4Q9H6D7 363 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 TRMT13Q9NUP7 481 aaKnown RBP14.11□□□□□ -0.15
TOP3B-202ENST00000398793 UMODL1Q5DID0 1318 aa14.11□□□□□ -0.15
TOP3B-202ENST00000398793 TUBBP07437 444 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 SMIM10L2AP0DMW4 78 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 SMIM10L2BP0DMW5 78 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 ICAM3P32942 547 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 RAP1GAPP47736 663 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 PPARDQ03181 441 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 NFRKBQ6P4R8 1299 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 SLC30A5Q8TAD4 765 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 DHX33Q9H6R0 707 aaKnown RBP14.1□□□□□ -0.15
TOP3B-202ENST00000398793 GOLGA2P5Q9HBQ8 144 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 SLC40A1Q9NP59 571 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 GJD2Q9UKL4 321 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 EPN1Q9Y6I3 576 aaPredicted RBP14.1□□□□□ -0.15
TOP3B-202ENST00000398793 MEIS3P2A8K0S8 358 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 MAPTP10636 758 aaKnown RBP14.1□□□□□ -0.15
TOP3B-202ENST00000398793 UCHL3P15374 230 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 DRAP1Q14919 205 aaPredicted RBP14.1□□□□□ -0.15
TOP3B-202ENST00000398793 MTFR1Q15390 333 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 GLYCTKQ8IVS8 523 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 SLC35F6Q8N357 371 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 COG1Q8WTW3 980 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 U2AF1L4Q8WU68 220 aaKnown RBP14.1□□□□□ -0.15
TOP3B-202ENST00000398793 ARHGAP20Q9P2F6 1191 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 MYO1AQ9UBC5 1043 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 PARP2Q9UGN5 583 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 PIN4Q9Y237 131 aaKnown RBP14.1□□□□□ -0.15
TOP3B-202ENST00000398793 IGSF9BQ9UPX0 1349 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 SLC15A5A6NIM6 579 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 FOXN3O00409 490 aaPredicted RBP14.1□□□□□ -0.15
TOP3B-202ENST00000398793 SNUPNO95149 360 aaKnown RBP14.1□□□□□ -0.15
TOP3B-202ENST00000398793 PDCLQ13371 301 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 IQCEQ6IPM2 695 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 PHLDB3Q6NSJ2 640 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 PALB2Q86YC2 1186 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 ZBTB8OSQ8IWT0 167 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 HASPINQ8TF76 798 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 SLC20A1Q8WUM9 679 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 TMEM40Q8WWA1 233 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 XPNPEP3Q9NQH7 507 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 INPP5FQ9Y2H2 1132 aa14.1□□□□□ -0.15
TOP3B-202ENST00000398793 NFASCO94856 1347 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 CYP26A1O43174 497 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 NCK2O43639 380 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 ZEB2O60315 1214 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 NOL4O94818 638 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 GJC1P36383 396 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 ZNF131P52739 623 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 CDH8P55286 799 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 ADAT2Q7Z6V5 191 aaKnown RBP14.09□□□□□ -0.15
TOP3B-202ENST00000398793 CCDC13Q8IYE1 715 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 LPPQ93052 612 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 SIK3Q9Y2K2 1263 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 TRIP12Q14669 1992 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-202ENST00000398793 KAT6AQ92794 2004 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 GOLGA6BA6NDN3 693 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 HBP1O60381 514 aa14.09□□□□□ -0.15
TOP3B-202ENST00000398793 DKC1O60832 514 aaKnown RBP eCLIP14.09□□□□□ -0.15
TOP3B-202ENST00000398793 CST3P01034 146 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-202ENST00000398793 ZNF865P0CJ78 1059 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-202ENST00000398793 IGFBP6P24592 240 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-202ENST00000398793 TBX2Q13207 712 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-202ENST00000398793 WDR93Q6P2C0 686 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms