RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CLUL1Q15846 466 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 GJC2Q5T442 439 aaPredicted RBP3.59□□□□□ -1.83
CD47-203ENST00000398258 KLHDC10Q6PID8 442 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 BTNL9Q6UXG8 535 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 WDR75Q8IWA0 830 aaKnown RBP3.59□□□□□ -1.83
CD47-203ENST00000398258 SYNE4Q8N205 404 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 FAM43AQ8N2R8 423 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 SLC35G2Q8TBE7 412 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 ATXN2LQ8WWM7 1075 aaKnown RBP3.59□□□□□ -1.83
CD47-203ENST00000398258 GAB3Q8WWW8 586 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 WASF1Q92558 559 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 COA7Q96BR5 231 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 SLC39A13Q96H72 371 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 NOL10Q9BSC4 688 aaKnown RBP3.59□□□□□ -1.83
CD47-203ENST00000398258 ZNF700Q9H0M5 742 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 RSAD1Q9HA92 442 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 ARNT2Q9HBZ2 717 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 PRDM11Q9NQV5 511 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 POLR3BQ9NW08 1133 aaPredicted RBP3.59□□□□□ -1.83
CD47-203ENST00000398258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.59□□□□□ -1.83
CD47-203ENST00000398258 OBP2AQ9NY56 170 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 SERPINB13Q9UIV8 391 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 ZBTB21Q9ULJ3 1066 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 USP18Q9UMW8 372 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 VWA7Q9Y334 891 aa3.59□□□□□ -1.83
CD47-203ENST00000398258 POLR2AP24928 1970 aaKnown RBP3.59□□□□□ -1.83
CD47-203ENST00000398258 A0A1W2PR48 441 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 AHRRA9YTQ3 701 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 IL33O95760 270 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 HRGP04196 525 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 CT47B1P0C2W7 299 aaPredicted RBP3.58□□□□□ -1.84
CD47-203ENST00000398258 OSMP13725 252 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 HNRNPLP14866 589 aaKnown RBP eCLIP3.58□□□□□ -1.84
CD47-203ENST00000398258 HSPA6P17066 643 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 EDNRBP24530 442 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 PLA2G5P39877 138 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 MEF2AQ02078 507 aaPredicted RBP3.58□□□□□ -1.84
CD47-203ENST00000398258 PPARAQ07869 468 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 MGAT2Q10469 447 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 FOXI1Q12951 378 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 ACAP2Q15057 778 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 CHST15Q7LFX5 561 aaPredicted RBP3.58□□□□□ -1.84
CD47-203ENST00000398258 ANKRD53Q8N9V6 530 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 ANKS1AQ92625 1134 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 HOXB13Q92826 284 aaPredicted RBP3.58□□□□□ -1.84
CD47-203ENST00000398258 HPS3Q969F9 1004 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 HIST1H2AHQ96KK5 128 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 WDR92Q96MX6 357 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 TAAR9Q96RI9 348 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 HIST1H2AJQ99878 128 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 LRFN3Q9BTN0 628 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 ACE2Q9BYF1 805 aaPredicted RBP3.58□□□□□ -1.84
CD47-203ENST00000398258 GREM2Q9H772 168 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 NMRK2Q9NPI5 230 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 DDX21Q9NR30 783 aaKnown RBP eCLIP3.58□□□□□ -1.84
CD47-203ENST00000398258 ANKFY1Q9P2R3 1169 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 GABBR1Q9UBS5 961 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 NOB1Q9ULX3 412 aaKnown RBP3.58□□□□□ -1.84
CD47-203ENST00000398258 SORCS3Q9UPU3 1222 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 IPPQ9Y573 584 aa3.58□□□□□ -1.84
CD47-203ENST00000398258 RBM8AQ9Y5S9 174 aaKnown RBP3.58□□□□□ -1.84
CD47-203ENST00000398258 EPN1Q9Y6I3 576 aaPredicted RBP3.58□□□□□ -1.84
CD47-203ENST00000398258 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 DNAJC9-AS1A6NH13 148 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 VSTM5A8MXK1 200 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 H3BML4 177 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 STC2O76061 302 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 PDCP20941 246 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 CTGFP29279 349 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 NRG3P56975 720 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 PPP3CAQ08209 521 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 GALEQ14376 348 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 MAN2A1Q16706 1144 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 MAP9Q49MG5 647 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 PRR16Q569H4 304 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 C19orf54Q5BKX5 351 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 MUM1L1Q5H9M0 696 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 FKBP15Q5T1M5 1219 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 NAIF1Q69YI7 327 aaPredicted RBP3.57□□□□□ -1.84
CD47-203ENST00000398258 USP45Q70EL2 814 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 GLB1L2Q8IW92 636 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 CCAR1Q8IX12 1150 aaKnown RBP3.57□□□□□ -1.84
CD47-203ENST00000398258 CCDC146Q8IYE0 955 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 UNC5BQ8IZJ1 945 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 MIER2Q8N344 545 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 Q8N9P0 234 aaPredicted RBP3.57□□□□□ -1.84
CD47-203ENST00000398258 SIMC1Q8NDZ2 872 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.57□□□□□ -1.84
CD47-203ENST00000398258 CPT1CQ8TCG5 803 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 GCDHQ92947 438 aaPredicted RBP3.57□□□□□ -1.84
CD47-203ENST00000398258 SLC2A13Q96QE2 648 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 GTPBP4Q9BZE4 634 aaKnown RBP3.57□□□□□ -1.84
CD47-203ENST00000398258 WDR11Q9BZH6 1224 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 SLC6A15Q9H2J7 730 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 SERHL2Q9H4I8 314 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 C1orf112Q9NSG2 853 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 SYNPO2Q9UMS6 1093 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 LIMCH1Q9UPQ0 1083 aa3.57□□□□□ -1.84
CD47-203ENST00000398258 SETD1BQ9UPS6 1966 aaKnown RBP3.57□□□□□ -1.84
CD47-203ENST00000398258 ARHGEF17Q96PE2 2063 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms