RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 EML1O00423 815 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 ODC1P11926 461 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 CEP85LQ5SZL2 805 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 CD99L2Q8TCZ2 262 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 L3MBTL3Q96JM7 780 aaPredicted RBP16.35■□□□□ 0.21
LSS-202ENST00000397728 TTC25Q96NG3 672 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 SMYD2Q9NRG4 433 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 ZNF142P52746 1687 aaPredicted RBP16.35■□□□□ 0.21
LSS-202ENST00000397728 CCDC85CA6NKD9 419 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 CYBBP04839 570 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 KRT7P08729 469 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 BBS9Q3SYG4 887 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
LSS-202ENST00000397728 SH3BP5LQ7L8J4 393 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 PARVAQ9NVD7 372 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 FARP1Q9Y4F1 1045 aaPredicted RBP16.35■□□□□ 0.21
LSS-202ENST00000397728 FHOD1Q9Y613 1164 aa16.35■□□□□ 0.21
LSS-202ENST00000397728 MEIS2O14770 477 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 PEX10O60683 326 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 GRAP2O75791 330 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 POMCP01189 267 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 PDGFRAP16234 1089 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 CASP4P49662 377 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 SETDB1Q15047 1291 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 CCDC6Q16204 474 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 SLITRK1Q96PX8 696 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 EHD2Q9NZN4 543 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 DBR1Q9UK59 544 aaKnown RBP16.34■□□□□ 0.21
LSS-202ENST00000397728 TBKBP1A7MCY6 615 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 I3L4J1 428 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 HGSO14964 777 aaPredicted RBP16.34■□□□□ 0.21
LSS-202ENST00000397728 LRG1P02750 347 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 THOC5Q13769 683 aaKnown RBP16.34■□□□□ 0.21
LSS-202ENST00000397728 BTG3Q14201 252 aaPredicted RBP16.34■□□□□ 0.21
LSS-202ENST00000397728 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.34■□□□□ 0.21
LSS-202ENST00000397728 NUDT18Q6ZVK8 323 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 EPB41L5Q9HCM4 733 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 PLCB1Q9NQ66 1216 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 ZMYND10O75800 440 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 CABYRO75952 493 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 URODP06132 367 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 INHBAP08476 426 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 COG7P83436 770 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 FYB2Q5VWT5 728 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 CCDC60Q8IWA6 550 aaPredicted RBP16.34■□□□□ 0.21
LSS-202ENST00000397728 KBTBD4Q9NVX7 518 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 CASTOR2A6NHX0 329 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 CDH6P55285 790 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 BCAR1P56945 870 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 ZNF720Q7Z2F6 126 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 UBA3Q8TBC4 463 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 NAGPAQ9UK23 515 aa16.34■□□□□ 0.21
LSS-202ENST00000397728 ZBTB39O15060 712 aa16.33■□□□□ 0.21
LSS-202ENST00000397728 GUCY2CP25092 1073 aa16.33■□□□□ 0.21
LSS-202ENST00000397728 EPC2Q52LR7 807 aa16.33■□□□□ 0.21
LSS-202ENST00000397728 RAPH1Q70E73 1250 aa16.33■□□□□ 0.21
LSS-202ENST00000397728 CD302Q8IX05 232 aa16.33■□□□□ 0.21
LSS-202ENST00000397728 IL31RAQ8NI17 732 aa16.33■□□□□ 0.21
LSS-202ENST00000397728 USP20Q9Y2K6 914 aa16.33■□□□□ 0.21
LSS-202ENST00000397728 EVI5O60447 810 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 MYBL1P10243 752 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 MMS22LQ6ZRQ5 1243 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 CCDC13Q8IYE1 715 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.33■□□□□ 0.24e-7■■□□□ 11.9
LSS-202ENST00000397728 SP110Q9HB58 689 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 RNF14Q9UBS8 474 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 EGFRP00533 1210 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 GRK4P32298 578 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 GARSP41250 739 aaKnown RBP16.33■□□□□ 0.2
LSS-202ENST00000397728 VPS52Q8N1B4 723 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 FAN1Q9Y2M0 1017 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 ALDH2P05091 517 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 C2orf54Q08AI8 447 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 SF3A3Q12874 501 aaKnown RBP eCLIP16.33■□□□□ 0.24e-7■■■■□ 19.7
LSS-202ENST00000397728 ZNF211Q13398 564 aaPredicted RBP16.33■□□□□ 0.2
LSS-202ENST00000397728 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 LBX2Q6XYB7 198 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 STKLD1Q8NE28 680 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 MED15Q96RN5 788 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 SNTG2Q9NY99 539 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 PCDHB2Q9Y5E7 798 aa16.33■□□□□ 0.2
LSS-202ENST00000397728 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
LSS-202ENST00000397728 FAM200BP0CF97 657 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 CXCL8P10145 99 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 GARTP22102 1010 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 AKAP5P24588 427 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 PMLP29590 882 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 SULT1E1P49888 294 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 SNX17Q15036 470 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 CAPN11Q9UMQ6 739 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 TOMM70O94826 608 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 CYP3A4P08684 503 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 IRF1P10914 325 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 FSD1LQ9BXM9 530 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 PORCNQ9H237 461 aa16.32■□□□□ 0.2
LSS-202ENST00000397728 RSPH14Q9UHP6 348 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms