RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PIK3CAP42336 1068 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 GSDMDP57764 484 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 ENPEPQ07075 957 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 TRIM14Q14142 442 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 DUOXA2Q1HG44 320 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 EPC2Q52LR7 807 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 CACNA2D4Q7Z3S7 1137 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 DEFB128Q7Z7B8 93 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 EHBP1Q8NDI1 1231 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 KIF12Q96FN5 646 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 SNX27Q96L92 541 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 NUP58Q9BVL2 599 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 TTYH3Q9C0H2 523 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 P4HA2O15460 535 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 GUCY2FP51841 1108 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 DSC3Q14574 896 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 ZACNQ401N2 412 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 DBF4BQ8NFT6 615 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 LMO3Q8TAP4 145 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 CACTINQ8WUQ7 758 aaKnown RBP22.89■■□□□ 1.25
CPNE1-204ENST00000397443 ANKRD36BP1Q96IX9 119 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 SIX2Q9NPC8 291 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 RAB20Q9NX57 234 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 TBX21Q9UL17 535 aa22.89■■□□□ 1.25
CPNE1-204ENST00000397443 LUC7L2Q9Y383 392 aaKnown RBP22.89■■□□□ 1.25
CPNE1-204ENST00000397443 MFAP3LO75121 409 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 HLA-DRAP01903 254 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 TNNC2P02585 160 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 KRT9P35527 623 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 TMEM132DQ14C87 1099 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 KLHDC7AQ5VTJ3 777 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 C15orf39Q6ZRI6 1047 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 TRAPPC11Q7Z392 1133 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 TC2NQ8N9U0 490 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 GANQ9H2C0 597 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 ASB7Q9H672 318 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 FHOD1Q9Y613 1164 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 VNN1O95497 513 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 ITGA4P13612 1032 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 DPY19L2P1Q6NXN4 242 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 ZMAT2Q96NC0 199 aaKnown RBP22.88■■□□□ 1.25
CPNE1-204ENST00000397443 AJAP1Q9UKB5 411 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-204ENST00000397443 CAPN11Q9UMQ6 739 aa22.88■■□□□ 1.25
CPNE1-204ENST00000397443 KRT19P08727 400 aa22.87■■□□□ 1.25
CPNE1-204ENST00000397443 UCHL3P15374 230 aa22.87■■□□□ 1.25
CPNE1-204ENST00000397443 RAPGEF1Q13905 1077 aa22.87■■□□□ 1.25
CPNE1-204ENST00000397443 RRAGAQ7L523 313 aa22.87■■□□□ 1.25
CPNE1-204ENST00000397443 RTN4RL1Q86UN2 441 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-204ENST00000397443 CCDC150Q8NCX0 1101 aa22.87■■□□□ 1.25
CPNE1-204ENST00000397443 ZFP42Q96MM3 310 aa22.87■■□□□ 1.25
CPNE1-204ENST00000397443 PLCB1Q9NQ66 1216 aa22.87■■□□□ 1.25
CPNE1-204ENST00000397443 CST3P01034 146 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-204ENST00000397443 SPOPLQ6IQ16 392 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 PHLDB3Q6NSJ2 640 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 CNGA4Q8IV77 575 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 ARHGEF19Q8IW93 802 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 LRRC8AQ8IWT6 810 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 PLEKHA5Q9HAU0 1116 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 CEP72Q9P209 647 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 COQ4Q9Y3A0 265 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 MLH1P40692 756 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 AP3M2P53677 418 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 NCOA4Q13772 614 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 PLEKHG4Q58EX7 1191 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 FIGNQ5HY92 759 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 HACE1Q8IYU2 909 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 ZNF397Q8NF99 534 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-204ENST00000397443 LINC01599Q8WXQ3 324 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 KCNF1Q9H3M0 494 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 APEX2Q9UBZ4 518 aa22.86■■□□□ 1.25
CPNE1-204ENST00000397443 TANC1Q9C0D5 1861 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 A0A0U1RQF3 1178 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 PMM2O15305 246 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 RAB27AP51159 221 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 POU5F1Q01860 360 aaKnown RBP22.85■■□□□ 1.25
CPNE1-204ENST00000397443 TRPC3Q13507 836 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 TCTN1Q2MV58 587 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 IQCEQ6IPM2 695 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 PPM1KQ8N3J5 372 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 C1orf127Q8N9H9 656 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 SEPT8Q92599 483 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 C18orf25Q96B23 403 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-204ENST00000397443 GAD1Q99259 594 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 UBE2TQ9NPD8 197 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-204ENST00000397443 ABHD10Q9NUJ1 306 aa22.85■■□□□ 1.25
CPNE1-204ENST00000397443 TRIM43BA6NCK2 446 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 LRRC53A6NM62 1247 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 ITGB3P05106 788 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 ITGB8P26012 769 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 ZBED6P86452 979 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 ARHGAP44Q17R89 818 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 ALKAL1Q6UXT8 129 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 AGMOQ6ZNB7 445 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 CD302Q8IX05 232 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 TATDN2Q93075 761 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 TRIM43Q96BQ3 446 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-204ENST00000397443 RGS18Q9NS28 235 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 CNTN3Q9P232 1028 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 TUBGCP4Q9UGJ1 667 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 DNAJC12Q9UKB3 198 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms