RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CDH23Q9H251 3354 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 TTC26A0AVF1 554 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 F8W810 466 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 SMC2O95347 1197 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 STK4Q13043 487 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 ADGRD2Q7Z7M1 963 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 MRPL43Q8N983 215 aaKnown RBP27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 HASPINQ8TF76 798 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 TSPAN18Q96SJ8 248 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 GOLGA2P5Q9HBQ8 144 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 COG5Q9UP83 839 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 SSX2IPQ9Y2D8 614 aa27.58■■■□□ 2.01
TSPAN4-207ENST00000397411 GOLGA8IPA6NC78 632 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 GOLGA8JA6NMD2 632 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 PER2O15055 1255 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 KIAA0391O15091 583 aaKnown RBP27.57■■■□□ 2
TSPAN4-207ENST00000397411 FAM189A1O60320 539 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 B3GAT3O94766 335 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 KIF20AO95235 890 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 SOD2P04179 222 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 CTSAP10619 480 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 CLCNKBP51801 687 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 UBE2HP62256 183 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 HYAL1Q12794 435 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 PNOCQ13519 176 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 KNOP1Q1ED39 458 aaKnown RBP27.57■■■□□ 2
TSPAN4-207ENST00000397411 FUT10Q6P4F1 479 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 AUTS2Q8WXX7 1259 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 C18orf25Q96B23 403 aaPredicted RBP27.57■■■□□ 2
TSPAN4-207ENST00000397411 CBWD1Q9BRT8 395 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 ZBP1Q9H171 429 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 MRPL17Q9NRX2 175 aaKnown RBP27.57■■■□□ 2
TSPAN4-207ENST00000397411 CLDND1Q9NY35 253 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.57■■■□□ 2
TSPAN4-207ENST00000397411 ATG2AQ2TAZ0 1938 aa27.57■■■□□ 2
TSPAN4-207ENST00000397411 TRANK1O15050 2925 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.56■■■□□ 2
TSPAN4-207ENST00000397411 HIDE1A8MVS5 230 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 C2CD2LO14523 706 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 MEFVO15553 781 aaPredicted RBP27.56■■■□□ 2
TSPAN4-207ENST00000397411 EXTL3O43909 919 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 URODP06132 367 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 RPL9P32969 192 aaKnown RBP27.56■■■□□ 2
TSPAN4-207ENST00000397411 HOXD13P35453 343 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 SNRPFP62306 86 aaKnown RBP27.56■■■□□ 2
TSPAN4-207ENST00000397411 HERC2P3Q9BVR0 1158 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 VN1R3Q9BXE9 311 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 RMND1Q9NWS8 449 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 THEGQ9P2T0 379 aa27.56■■■□□ 2
TSPAN4-207ENST00000397411 UBQLN1Q9UMX0 589 aaKnown RBP27.56■■■□□ 2
TSPAN4-207ENST00000397411 SF3B1O75533 1304 aaKnown RBP eCLIP27.56■■■□□ 23e-9■■■■■ 206.8
TSPAN4-207ENST00000397411 C2orf71A6NGG8 1288 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 RHOBTB3O94955 611 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 KIF4AO95239 1232 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 IL18RAPO95256 599 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 POU5F1Q01860 360 aaKnown RBP27.55■■■□□ 2
TSPAN4-207ENST00000397411 SOX4Q06945 474 aaPredicted RBP27.55■■■□□ 2
TSPAN4-207ENST00000397411 BMT2Q1RMZ1 405 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 USP41Q3LFD5 358 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 TAS1R1Q7RTX1 841 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 GPD1LQ8N335 351 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 BEST2Q8NFU1 509 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 CDCA3Q99618 268 aaPredicted RBP27.55■■■□□ 2
TSPAN4-207ENST00000397411 EMILIN2Q9BXX0 1053 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 ASB7Q9H672 318 aa27.55■■■□□ 2
TSPAN4-207ENST00000397411 CGNQ9P2M7 1197 aaKnown RBP27.55■■■□□ 2
TSPAN4-207ENST00000397411 PODXLO00592 558 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 CLIC2O15247 247 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 TRAPPC3O43617 180 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 GTF2F1P35269 517 aaKnown RBP eCLIP27.54■■■□□ 25e-7■■■■■ 34.9
TSPAN4-207ENST00000397411 GLUD2P49448 558 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 ELAVL2Q12926 359 aaKnown RBP27.54■■■□□ 2
TSPAN4-207ENST00000397411 KCNB1Q14721 858 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 TMEM132DQ14C87 1099 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 UPP1Q16831 310 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 JADE1Q6IE81 842 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 CRELD2Q6UXH1 353 aaPredicted RBP27.54■■■□□ 2
TSPAN4-207ENST00000397411 CEP57Q86XR8 500 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 KIAA0895Q8NCT3 520 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 GOLGA5Q8TBA6 731 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 SMARCE1Q969G3 411 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 PABPC5Q96DU9 382 aaKnown RBP27.54■■■□□ 2
TSPAN4-207ENST00000397411 GPR62Q9BZJ7 368 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 KIAA1586Q9HCI6 787 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 AGPAT3Q9NRZ7 376 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 RBAKQ9NYW8 714 aaPredicted RBP27.54■■■□□ 2
TSPAN4-207ENST00000397411 HSPBP1Q9NZL4 362 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 NUB1Q9Y5A7 615 aa27.54■■■□□ 2
TSPAN4-207ENST00000397411 PDCD11Q14690 1871 aaKnown RBP27.53■■■□□ 2
TSPAN4-207ENST00000397411 FSD2A1L4K1 749 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 ZNF233A6NK53 670 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 TGFB1I1O43294 461 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 ADRB2P07550 413 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 CYP3A5P20815 502 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 CYP2J2P51589 502 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 DUSP6Q16828 381 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 AAK1Q2M2I8 961 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 FAM171A1Q5VUB5 890 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.53■■■□□ 21e-6■■■■□ 22.2
TSPAN4-207ENST00000397411 GBP4Q96PP9 640 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms