RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 TP73O15350 636 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 ECEL1O95672 775 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 GH2P01242 217 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 GYS1P13807 737 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 PTDSS1P48651 473 aaKnown RBP25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 RPS6KA3P51812 740 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 KIF22Q14807 665 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 SRRM1Q8IYB3 904 aaKnown RBP25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 BCRP11274 1271 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 LBRQ14739 615 aaKnown RBP25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 LLGL2Q6P1M3 1020 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 PRUNE1Q86TP1 453 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 LONP2Q86WA8 852 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 SLC13A5Q86YT5 568 aaPredicted RBP25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 ZNF564Q8TBZ8 553 aaPredicted RBP25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 ASAP3Q8TDY4 903 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 ZNF653Q96CK0 615 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 LXNQ9BS40 222 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 TTC4O95801 387 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 ARP10275 920 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 ECE1P42892 770 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 POLGP54098 1239 aaPredicted RBP25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 KLC1Q07866 573 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 STRN3Q13033 797 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 TRAF1Q13077 416 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 RPS6KC1Q96S38 1066 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 PAIP2Q9BPZ3 127 aaKnown RBP25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 KIAA1683Q9H0B3 1180 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 CHKBQ9Y259 395 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 TAF1LQ8IZX4 1826 aa25.57■■□□□ 1.68
CSNK1E-203ENST00000396832 BBOX1O75936 387 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 HADHBP55084 474 aaKnown RBP25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 KRT17Q04695 432 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 CCDC127Q96BQ5 260 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 LRRC37BQ96QE4 947 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 TBC1D10AQ9BXI6 508 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 UNC45AQ9H3U1 944 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 CMPK2Q5EBM0 449 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 ENDOVQ8N8Q3 282 aaKnown RBP25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 SUPT20HQ8NEM7 779 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 TTC8Q8TAM2 541 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 DNAJC9Q8WXX5 260 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 ADAM33Q9BZ11 813 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 ASB3Q9Y575 518 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 A0A1W2PRG0 241 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 SIX1Q15475 284 aaPredicted RBP25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 SGSM1Q2NKQ1 1148 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 PLEKHO2Q8TD55 490 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 CHST7Q9NS84 486 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 C2CD2Q9Y426 696 aa25.56■■□□□ 1.68
CSNK1E-203ENST00000396832 BMP3P12645 472 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 ACADSP16219 412 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 TSNAXIP1Q2TAA8 658 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 GALNT15Q8N3T1 639 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 C7orf43Q8WVR3 580 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 DHX38Q92620 1227 aaKnown RBP25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 CCDC17Q96LX7 622 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 PRR12Q9ULL5 1215 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 ARHGEF35A5YM69 484 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 RGL2O15211 777 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 RTN3O95197 1032 aaPredicted RBP25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 CETPP11597 493 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 EPHB2P29323 1055 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 CNGA1P29973 690 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 ABCB5Q2M3G0 1257 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 DAW1Q8N136 415 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 INPP5DQ92835 1189 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 COA1Q9GZY4 146 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 WHRNQ9P202 907 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 FAM198AQ9UFP1 575 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 NAALADL1Q9UQQ1 740 aa25.55■■□□□ 1.68
CSNK1E-203ENST00000396832 ENTPD5O75356 428 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 GJC1P36383 396 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 VAMP7P51809 220 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 YARSP54577 528 aaKnown RBP25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 IL9RQ01113 521 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 ZNF449Q6P9G9 518 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 PPP1R21Q6ZMI0 780 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 APLFQ8IW19 511 aaPredicted RBP25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 EPS8L1Q8TE68 723 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 SLC7A6OSQ96CW6 309 aaPredicted RBP25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 ZNF577Q9BSK1 485 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 MKNK1Q9BUB5 465 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 DMAC2Q9NW81 257 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 DLGAP2Q9P1A6 1054 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 THAP12O43422 761 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 PSMD10O75832 226 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 FOSP01100 380 aaPredicted RBP25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 CHRNB2P17787 502 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 NYAP2Q9P242 653 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 USH1CQ9Y6N9 552 aa25.54■■□□□ 1.68
CSNK1E-203ENST00000396832 MAPK13O15264 365 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 SSTR3P32745 418 aaPredicted RBP25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 GCLCP48506 637 aaPredicted RBP25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 SGO2Q562F6 1265 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 CERKQ8TCT0 537 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 HERPUD2Q9BSE4 406 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 HEMGNQ9BXL5 484 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 WNT8AQ9H1J5 351 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms