RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 BACE2Q9Y5Z0 518 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 CDY1Q9Y6F8 540 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 TTLL13PA6NNM8 815 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 NARSO43776 548 aaKnown RBP17.92■□□□□ 0.46
DDR1-229ENST00000396342 KRT18P05783 430 aaKnown RBP17.92■□□□□ 0.46
DDR1-229ENST00000396342 SCP2P22307 547 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 FGFR3P22607 806 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 CLCNKBP51801 687 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 C4orf32Q8N8J7 132 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 APPL2Q8NEU8 664 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 PPP1R10Q96QC0 940 aaKnown RBP17.92■□□□□ 0.46
DDR1-229ENST00000396342 CDT1Q9H211 546 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 TBC1D17Q9HA65 648 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 ANKFY1Q9P2R3 1169 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 MTRRQ9UBK8 725 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 KCNH3Q9ULD8 1083 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 MRPS23Q9Y3D9 190 aaKnown RBP17.92■□□□□ 0.46
DDR1-229ENST00000396342 SIT1Q9Y3P8 196 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.92■□□□□ 0.46
DDR1-229ENST00000396342 NUMBLQ9Y6R0 609 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 ZNF318Q5VUA4 2279 aa17.92■□□□□ 0.46
DDR1-229ENST00000396342 PROB1E7EW31 1015 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 PODXLO00592 558 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 SYN3O14994 580 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 SLC16A4O15374 487 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 CLDN3O15551 220 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 XPOTO43592 962 aaKnown RBP17.91■□□□□ 0.46
DDR1-229ENST00000396342 BMP15O95972 392 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 POU2F2P09086 479 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 GUCY2CP25092 1073 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 ABCD1P33897 745 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 NBL1P41271 181 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 ARPP19P56211 112 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 ANGPT1Q15389 498 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 ECM1Q16610 540 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 UPP1Q16831 310 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 IQCEQ6IPM2 695 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 RINT1Q6NUQ1 792 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 GPR152Q8TDT2 470 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 SPIRE2Q8WWL2 714 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 TARS2Q9BW92 718 aaKnown RBP17.91■□□□□ 0.46
DDR1-229ENST00000396342 SEMA4AQ9H3S1 761 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 SLC2A4RGQ9NR83 387 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 SMC3Q9UQE7 1217 aa17.91■□□□□ 0.46
DDR1-229ENST00000396342 VWA3AA6NCI4 1184 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 ANHXE9PGG2 379 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 ZNF197O14709 1029 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 SLC26A4O43511 780 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 N4BP1O75113 896 aaKnown RBP17.9■□□□□ 0.46
DDR1-229ENST00000396342 TOM1L1O75674 476 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 PAPLNO95428 1278 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 PLS3P13797 630 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 MCM4P33991 863 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 UBA7P41226 1012 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 HTR4Q13639 388 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 NOLC1Q14978 699 aaKnown RBP eCLIP17.9■□□□□ 0.46
DDR1-229ENST00000396342 ARL6IP4Q66PJ3 421 aaKnown RBP17.9■□□□□ 0.46
DDR1-229ENST00000396342 CWF19L1Q69YN2 538 aaKnown RBP17.9■□□□□ 0.46
DDR1-229ENST00000396342 PHLDB3Q6NSJ2 640 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 FGF13Q92913 245 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 AK8Q96MA6 479 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.9■□□□□ 0.46
DDR1-229ENST00000396342 ARHGAP28Q9P2N2 729 aa17.9■□□□□ 0.46
DDR1-229ENST00000396342 NCAM2O15394 837 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 PTPN2P17706 415 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 TKTP29401 623 aaKnown RBP17.89■□□□□ 0.45
DDR1-229ENST00000396342 RAD51AP2Q09MP3 1159 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 NAB2Q15742 525 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 SPECC1Q5M775 1068 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 CYP4A22Q5TCH4 519 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 ZNF280DQ6N043 979 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 ZPBP2Q6X784 338 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 C1orf186Q6ZWK4 172 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 FRMD5Q7Z6J6 570 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 USP37Q86T82 979 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 ZNF461Q8TAF7 563 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 SNX27Q96L92 541 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 RUSC1Q9BVN2 902 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 OXCT2Q9BYC2 517 aaPredicted RBP17.89■□□□□ 0.45
DDR1-229ENST00000396342 BCO2Q9BYV7 579 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 CYP4F11Q9HBI6 524 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 GDE1Q9NZC3 331 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 MAFFQ9ULX9 164 aa17.89■□□□□ 0.45
DDR1-229ENST00000396342 MRPS17Q9Y2R5 130 aaKnown RBP17.89■□□□□ 0.45
DDR1-229ENST00000396342 ARHGEF37A1IGU5 675 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 SFI1A8K8P3 1242 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 PP2D1A8MPX8 630 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 CLTAP09496 248 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 KCNE1P15382 129 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 NPR3P17342 541 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 CDC25AP30304 524 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 LIG4P49917 911 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 TOB1P50616 345 aaPredicted RBP17.88■□□□□ 0.45
DDR1-229ENST00000396342 ATP2C1P98194 919 aaPredicted RBP17.88■□□□□ 0.45
DDR1-229ENST00000396342 CTXN3Q4LDR2 81 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 VARS2Q5ST30 1063 aaKnown RBP17.88■□□□□ 0.45
DDR1-229ENST00000396342 SYT2Q8N9I0 419 aaPredicted RBP17.88■□□□□ 0.45
DDR1-229ENST00000396342 NTPCRQ9BSD7 190 aaKnown RBP17.88■□□□□ 0.45
DDR1-229ENST00000396342 PLEKHA5Q9HAU0 1116 aa17.88■□□□□ 0.45
DDR1-229ENST00000396342 GOLGA2P5Q9HBQ8 144 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms