RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 TMEM60Q9H2L4 133 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 PACSIN2Q9UNF0 486 aaPredicted RBP10.27□□□□□ -0.76
CDRT1-204ENST00000395906 LOC105371267A0A1B0GV96 52 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 A0A1W2PQ67 120 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ANKRD34BA5PLL1 514 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 KRIT1O00522 736 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 GSC2O15499 205 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 EXOC3O60645 756 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ZWINTO95229 277 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 LDHCP07864 332 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 PABPC1P11940 636 aaKnown RBP10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ZNF12P17014 697 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 PCSK6P29122 969 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ATP5DP30049 168 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 SLC5A2P31639 672 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 WASHC5Q12768 1159 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 VSTM1Q6UX27 236 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 CLEC4GQ6UXB4 293 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ANKRD42Q8N9B4 389 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ZFP28Q8NHY6 868 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 GIMAP1Q8WWP7 306 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 PHF12Q96QT6 1004 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 TUBB6Q9BUF5 446 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ROPN1BQ9BZX4 212 aaPredicted RBP10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ROPN1Q9HAT0 212 aaPredicted RBP10.27□□□□□ -0.77
CDRT1-204ENST00000395906 GID8Q9NWU2 228 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 NDE1Q9NXR1 346 aa10.27□□□□□ -0.77
CDRT1-204ENST00000395906 ZMAT5Q9UDW3 170 aaKnown RBP10.27□□□□□ -0.77
CDRT1-204ENST00000395906 DBR1Q9UK59 544 aaKnown RBP10.27□□□□□ -0.77
CDRT1-204ENST00000395906 COL5A3P25940 1745 aaPredicted RBP10.27□□□□□ -0.77
CDRT1-204ENST00000395906 MYH6P13533 1939 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 GAS8O95995 478 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 CLPTM1O96005 669 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 OCM2P0CE71 109 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 OCMP0CE72 109 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 GYS1P13807 737 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 UQCRBP14927 111 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 SERPINB6P35237 376 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 NADK2Q4G0N4 442 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 KAZNQ674X7 775 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 ERI1Q8IV48 349 aaKnown RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 FAM20CQ8IXL6 584 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 GOLM1Q8NBJ4 401 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 CCDC110Q8TBZ0 833 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 CELF1Q92879 486 aaKnown RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 MCUR1Q96AQ8 359 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 BIRC8Q96P09 236 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 KLHL4Q9C0H6 718 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 LRRC27Q9C0I9 530 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 PARVGQ9HBI0 331 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 PIH1D3Q9NQM4 214 aaKnown RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 GINM1Q9NU53 330 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 ZDHHC18Q9NUE0 388 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 GIN1Q9NXP7 522 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 COL4A1P02462 1669 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 F8W8V4 182 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 RBAK-RBAKDNI3L0D1 243 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 PIK3CDO00329 1044 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 TFAP2AP05549 437 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 TAC1P20366 129 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 CDH3P22223 829 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 MZF1P28698 734 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 IL15P40933 162 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 SLCO1A2P46721 670 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 GSSP48637 474 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 GPC3P51654 580 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 HSD17B4P51659 736 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 FKBP4Q02790 459 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 THOC5Q13769 683 aaKnown RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 ASTE1Q2TB18 679 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 TAF1BQ53T94 588 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 SPOPLQ6IQ16 392 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 NIPAL1Q6NVV3 410 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 PDSS2Q86YH6 399 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 ADSSL1Q8N142 457 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 OR6Y1Q8NGX8 325 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 LBHD1Q9BQE6 289 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 RPAP3Q9H6T3 665 aaPredicted RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 KCNK9Q9NPC2 374 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 AASDHPPTQ9NRN7 309 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 TBC1D23Q9NUY8 699 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 PLK2Q9NYY3 685 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 ZFP69BQ9UJL9 534 aa10.26□□□□□ -0.77
CDRT1-204ENST00000395906 NOC2LQ9Y3T9 749 aaKnown RBP10.26□□□□□ -0.77
CDRT1-204ENST00000395906 A0A0G2JLW4 131 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 SSU72P8A0A1W2PR75 194 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 KMOO15229 486 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 ADCY6O43306 1168 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 SLC26A4O43511 780 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 GTPBP6O43824 516 aaPredicted RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 ACADSBP45954 432 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 RPS3AP61247 264 aaKnown RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 GFPT1Q06210 699 aaPredicted RBP10.25□□□□□ -0.77
CDRT1-204ENST00000395906 STRN3Q13033 797 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 MOGSQ13724 837 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 SCARF1Q14162 830 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 C16orf72Q14CZ0 275 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 PDK3Q15120 406 aa10.25□□□□□ -0.77
CDRT1-204ENST00000395906 ARHGEF18Q6ZSZ5 1173 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms