RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SMARCD2Q92925 531 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 JPH2Q9BR39 696 aaPredicted RBP15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 EDEM2Q9BV94 578 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 MTRRQ9UBK8 725 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 MSRB2Q9Y3D2 182 aa15.26■□□□□ 0.03
VCPKMT-201ENST00000395859 MYBPHLA2RUH7 354 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 PTPN2P17706 415 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 FGFR3P22607 806 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 AKAP5P24588 427 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 NUCB1Q02818 461 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 SPIRE1Q08AE8 756 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 TUSC3Q13454 348 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 PLK5Q496M5 336 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 LRCH2Q5VUJ6 765 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 PLA2G4FQ68DD2 849 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 PDXDC1Q6P996 788 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 IFNLR1Q8IU57 520 aaPredicted RBP15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 MFSD6LQ8IWD5 586 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 HASPINQ8TF76 798 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 BBC3Q96PG8 261 aaPredicted RBP15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 TEKT3Q9BXF9 490 aa15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 RBM28Q9NW13 759 aaKnown RBP15.25■□□□□ 0.03
VCPKMT-201ENST00000395859 LNP1A1A4G5 178 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 FAM221BA6H8Z2 402 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 EXTL3O43909 919 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 IGFBP6P24592 240 aaPredicted RBP15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 VIPR2P41587 438 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 SOX9P48436 509 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 RBM25P49756 843 aaKnown RBP15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 NPEPPSP55786 919 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 PTENP60484 403 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 APOA5Q6Q788 366 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 MIER3Q7Z3K6 550 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 PROSER1Q86XN7 944 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 REXO1Q8N1G1 1221 aaKnown RBP15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 SYNPOQ8N3V7 929 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 PSPC1Q8WXF1 523 aaKnown RBP15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 TMEM143Q96AN5 459 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 RSPRY1Q96DX4 576 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 CPB2Q96IY4 423 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 C8orf33Q9H7E9 229 aaPredicted RBP15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 BACE2Q9Y5Z0 518 aa15.24■□□□□ 0.03
VCPKMT-201ENST00000395859 DDX11L8A8MPP1 907 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 CDX4O14627 284 aaPredicted RBP15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 PTGESO14684 152 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 ZNF263O14978 683 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 SGSM2O43147 1006 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 ABLIM3O94929 683 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 ARF4P18085 180 aaPredicted RBP15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 FCHO2Q0JRZ9 810 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 ELAVL2Q12926 359 aaKnown RBP15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 PFKFB3Q16875 520 aaPredicted RBP15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 PKN3Q6P5Z2 889 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 CD300LGQ6UXG3 332 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 PDZD3Q86UT5 571 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 FERMT3Q86UX7 667 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 CEP57Q86XR8 500 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 RNF149Q8NC42 400 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 KIF12Q96FN5 646 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 APOL6Q9BWW8 343 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 LRRC2Q9BYS8 371 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 DUSP15Q9H1R2 295 aaPredicted RBP15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 PPME1Q9Y570 386 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 CDY1Q9Y6F8 540 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 APC2O95996 2303 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 ACACAQ13085 2346 aa15.23■□□□□ 0.03
VCPKMT-201ENST00000395859 CASTOR2A6NHX0 329 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 CHADO15335 359 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 HYAL3O43820 417 aaPredicted RBP15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 ERLIN2O94905 339 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 CHMLP26374 656 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 CTHP32929 405 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 EPHA5P54756 1037 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 DAB2IPQ5VWQ8 1189 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 B4GALNT3Q6L9W6 998 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 SLC7A3Q8WY07 619 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 CXCL16Q9H2A7 254 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 CACNA2D2Q9NY47 1150 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 KLK14Q9P0G3 267 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 WRAP73Q9P2S5 460 aaPredicted RBP15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 KLK13Q9UKR3 277 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 RBM8AQ9Y5S9 174 aaKnown RBP15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 ASXL3Q9C0F0 2248 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 NUP205Q92621 2012 aa15.22■□□□□ 0.03
VCPKMT-201ENST00000395859 BCLAF3A2AJT9 711 aaKnown RBP15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 SLC38A8A6NNN8 435 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 CYSRT1A8MQ03 144 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 SPECC1L-ADORA2AF8WAN1 911 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 ZNF197O14709 1029 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 ASAP2O43150 1006 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 PXNP49023 591 aaPredicted RBP15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 USP11P51784 963 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 PSMC5P62195 406 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 MBTD1Q05BQ5 628 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 POU5F1BQ06416 359 aa15.21■□□□□ 0.03
VCPKMT-201ENST00000395859 Q4G0T1 1027 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms