RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 OTOP3Q7RTS5 596 aa17.73■□□□□ 0.43
CXCL12-206ENST00000395795 UBALD2Q8IYN6 164 aa17.73■□□□□ 0.43
CXCL12-206ENST00000395795 SMG7Q92540 1137 aaKnown RBP17.73■□□□□ 0.43
CXCL12-206ENST00000395795 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
CXCL12-206ENST00000395795 REEP2Q9BRK0 252 aa17.73■□□□□ 0.43
CXCL12-206ENST00000395795 PRKD2Q9BZL6 878 aa17.73■□□□□ 0.43
CXCL12-206ENST00000395795 ZDHHC7Q9NXF8 308 aa17.73■□□□□ 0.43
CXCL12-206ENST00000395795 MTRRQ9UBK8 725 aa17.73■□□□□ 0.43
CXCL12-206ENST00000395795 TOM1L1O75674 476 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 B3GAT3O94766 335 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 PLCG1P19174 1290 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 TKTP29401 623 aaKnown RBP17.72■□□□□ 0.43
CXCL12-206ENST00000395795 AVPR2P30518 371 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 MCL1Q07820 350 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 RAB33AQ14088 237 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 KARSQ15046 597 aaKnown RBP17.72■□□□□ 0.43
CXCL12-206ENST00000395795 FAM173BQ6P4H8 233 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 ZPBP2Q6X784 338 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 CEP57Q86XR8 500 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 C18orf25Q96B23 403 aaPredicted RBP17.72■□□□□ 0.43
CXCL12-206ENST00000395795 KCNK12Q9HB15 430 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 EPS15L1Q9UBC2 864 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 CLIC4Q9Y696 253 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 PIEZO1Q92508 2521 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 NOTCH4Q99466 2003 aa17.72■□□□□ 0.43
CXCL12-206ENST00000395795 MYH11P35749 1972 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 TBC1D4O60343 1298 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 LONP1P36776 959 aaKnown RBP17.71■□□□□ 0.43
CXCL12-206ENST00000395795 CREMQ03060 361 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 ELAVL2Q12926 359 aaKnown RBP17.71■□□□□ 0.43
CXCL12-206ENST00000395795 MCM6Q14566 821 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 SLC39A4Q6P5W5 647 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 RSAD2Q8WXG1 361 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 RAD54LQ92698 747 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 UROC1Q96N76 676 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 ACAP3Q96P50 834 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 PHOX2BQ99453 314 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 CCDC94Q9BW85 323 aaPredicted RBP17.71■□□□□ 0.43
CXCL12-206ENST00000395795 FBXO2Q9UK22 296 aaPredicted RBP17.71■□□□□ 0.43
CXCL12-206ENST00000395795 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.43
CXCL12-206ENST00000395795 PDCD11Q14690 1871 aaKnown RBP17.71■□□□□ 0.43
CXCL12-206ENST00000395795 CACNA1HO95180 2353 aa17.71■□□□□ 0.42
CXCL12-206ENST00000395795 PIGRP01833 764 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 SYT1P21579 422 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 MRPL58Q14197 206 aaKnown RBP17.7■□□□□ 0.42
CXCL12-206ENST00000395795 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.42
CXCL12-206ENST00000395795 ZBTB6Q15916 424 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 ZBTB41Q5SVQ8 909 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 POTEHQ6S545 545 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 HAUS6Q7Z4H7 955 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 GPBP1Q86WP2 473 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 ACSF2Q96CM8 615 aaPredicted RBP17.7■□□□□ 0.42
CXCL12-206ENST00000395795 EPSTI1Q96J88 318 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 CCSER1Q9C0I3 900 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 DPP7Q9UHL4 492 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 CITO14578 2027 aa17.7■□□□□ 0.42
CXCL12-206ENST00000395795 TTC26A0AVF1 554 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 SPDYE4A6NLX3 237 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 PODXLO00592 558 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 NARSO43776 548 aaKnown RBP17.69■□□□□ 0.42
CXCL12-206ENST00000395795 BMP15O95972 392 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 ADRB2P07550 413 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 NPR3P17342 541 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 OR1D2P34982 312 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 UBA7P41226 1012 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 TNFSF9P41273 254 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 NTHL1P78549 312 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 SPECC1Q5M775 1068 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 APBB1IPQ7Z5R6 666 aaPredicted RBP17.69■□□□□ 0.42
CXCL12-206ENST00000395795 TMEM105Q8N8V8 129 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 CDK5RAP3Q96JB5 506 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 TOPORSQ9NS56 1045 aaPredicted RBP17.69■□□□□ 0.42
CXCL12-206ENST00000395795 ANKFY1Q9P2R3 1169 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 DUSP12Q9UNI6 340 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
CXCL12-206ENST00000395795 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
CXCL12-206ENST00000395795 ANHXE9PGG2 379 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 POU2F2P09086 479 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 CXCL8P10145 99 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 HARSP12081 509 aaKnown RBP17.68■□□□□ 0.42
CXCL12-206ENST00000395795 HOXA9P31269 272 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 SMTNP53814 917 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 YARSP54577 528 aaKnown RBP17.68■□□□□ 0.42
CXCL12-206ENST00000395795 TDGQ13569 410 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 CWF19L1Q69YN2 538 aaKnown RBP17.68■□□□□ 0.42
CXCL12-206ENST00000395795 SLC8B1Q6J4K2 584 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 SUGP1Q8IWZ8 645 aaKnown RBP17.68■□□□□ 0.42
CXCL12-206ENST00000395795 CLIC6Q96NY7 704 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 TCHPQ9BT92 498 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 SLC38A7Q9NVC3 462 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 LARSQ9P2J5 1176 aaKnown RBP17.68■□□□□ 0.42
CXCL12-206ENST00000395795 TUBGCP4Q9UGJ1 667 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 TBX20Q9UMR3 447 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 CDY1Q9Y6F8 540 aa17.68■□□□□ 0.42
CXCL12-206ENST00000395795 ABLIM3O94929 683 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 C8AP07357 584 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 HNRNPA1P09651 372 aaKnown RBP eCLIP17.67■□□□□ 0.42
CXCL12-206ENST00000395795 LAMP2P13473 410 aa17.67■□□□□ 0.42
CXCL12-206ENST00000395795 MARCKSP29966 332 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms