RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 FNIP2Q9P278 1114 aa12.09□□□□□ -0.47
TOM1-202ENST00000395736 SSX2IPQ9Y2D8 614 aa12.09□□□□□ -0.47
TOM1-202ENST00000395736 VPS37CA5D8V6 355 aaPredicted RBP12.08□□□□□ -0.48
TOM1-202ENST00000395736 TMEM189-UBE2V1I3L0A0 370 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 ADAM12O43184 909 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
TOM1-202ENST00000395736 TADA2AO75478 443 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 BRD1O95696 1058 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 ASGR2P07307 311 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 SPATA31D3P0C874 917 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 MAPTP10636 758 aaKnown RBP12.08□□□□□ -0.48
TOM1-202ENST00000395736 PLS3P13797 630 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 CLCNKBP51801 687 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 NCKAP1LP55160 1127 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 OSTNP61366 133 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 RESTQ13127 1097 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 SF3A1Q15459 793 aaKnown RBP12.08□□□□□ -0.48
TOM1-202ENST00000395736 ATAT1Q5SQI0 421 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 FAM171A1Q5VUB5 890 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 MPZL3Q6UWV2 235 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 SPATA31D4Q6ZUB0 917 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 ZBTB33Q86T24 672 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 PALB2Q86YC2 1186 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 ZDHHC14Q8IZN3 488 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 KCTD17Q8N5Z5 321 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 TDRD5Q8NAT2 981 aaKnown RBP12.08□□□□□ -0.48
TOM1-202ENST00000395736 KREMEN2Q8NCW0 462 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 LNX1Q8TBB1 728 aaPredicted RBP12.08□□□□□ -0.48
TOM1-202ENST00000395736 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 PIK3R5Q8WYR1 880 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 AK8Q96MA6 479 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 REEP2Q9BRK0 252 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 HAPLN2Q9GZV7 340 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.08□□□□□ -0.48
TOM1-202ENST00000395736 USTQ9Y2C2 406 aa12.08□□□□□ -0.48
TOM1-202ENST00000395736 RBM19Q9Y4C8 960 aaKnown RBP12.08□□□□□ -0.48
TOM1-202ENST00000395736 ANKRD11Q6UB99 2663 aaPredicted RBP12.08□□□□□ -0.48
TOM1-202ENST00000395736 DOCK8Q8NF50 2099 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 SETXQ7Z333 2677 aaKnown RBP12.07□□□□□ -0.48
TOM1-202ENST00000395736 SMIM28A0A1B0GU29 152 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 CCDC195A0A1B0GUA6 201 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 MCF2P10911 925 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 PLCG1P19174 1290 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 KARSQ15046 597 aaKnown RBP12.07□□□□□ -0.48
TOM1-202ENST00000395736 PTPAQ15257 358 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 PSMD5Q16401 504 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 UPP1Q16831 310 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 OTOGLQ3ZCN5 2332 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 SEZ6Q53EL9 994 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 FAM173BQ6P4H8 233 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 RSPO2Q6UXX9 243 aaPredicted RBP12.07□□□□□ -0.48
TOM1-202ENST00000395736 CCDC149Q6ZUS6 474 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 USP49Q70CQ1 688 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 KIAA2013Q8IYS2 634 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 TMEM130Q8N3G9 435 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 KCNN1Q92952 543 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 CDK5RAP3Q96JB5 506 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 CLSTN3Q9BQT9 956 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 TTPALQ9BTX7 342 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 RHOBTB2Q9BYZ6 727 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 DLL3Q9NYJ7 618 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 KCND2Q9NZV8 630 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 SORCS3Q9UPU3 1222 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 CLIC4Q9Y696 253 aa12.07□□□□□ -0.48
TOM1-202ENST00000395736 FRYQ5TBA9 3013 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 I3L4J1 428 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 ZZEF1O43149 2961 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 SLC26A4O43511 780 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 BMP15O95972 392 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 C1RP00736 705 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 HARSP12081 509 aaKnown RBP12.06□□□□□ -0.48
TOM1-202ENST00000395736 SYT1P21579 422 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 FGFR3P22607 806 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 LONP1P36776 959 aaKnown RBP12.06□□□□□ -0.48
TOM1-202ENST00000395736 BRCC3P46736 316 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 ZNF131P52739 623 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 PUM1Q14671 1186 aaKnown RBP eCLIP12.06□□□□□ -0.48
TOM1-202ENST00000395736 ST3GAL2Q16842 350 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.06□□□□□ -0.48
TOM1-202ENST00000395736 GPBP1Q86WP2 473 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 HDAC7Q8WUI4 952 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 COL26A1Q96A83 441 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 FIZ1Q96SL8 496 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 CCDC94Q9BW85 323 aaPredicted RBP12.06□□□□□ -0.48
TOM1-202ENST00000395736 WDR6Q9NNW5 1121 aaKnown RBP12.06□□□□□ -0.48
TOM1-202ENST00000395736 CNTN3Q9P232 1028 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 ANKFY1Q9P2R3 1169 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 LIMD1Q9UGP4 676 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 FBXO2Q9UK22 296 aaPredicted RBP12.06□□□□□ -0.48
TOM1-202ENST00000395736 FBXW11Q9UKB1 542 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 CLUHO75153 1309 aa12.06□□□□□ -0.48
TOM1-202ENST00000395736 DOCK6Q96HP0 2047 aa12.05□□□□□ -0.48
TOM1-202ENST00000395736 FAM189A1O60320 539 aa12.05□□□□□ -0.48
TOM1-202ENST00000395736 TOM1L1O75674 476 aa12.05□□□□□ -0.48
TOM1-202ENST00000395736 B3GAT3O94766 335 aa12.05□□□□□ -0.48
TOM1-202ENST00000395736 KCNE1P15382 129 aa12.05□□□□□ -0.48
TOM1-202ENST00000395736 TKTP29401 623 aaKnown RBP12.05□□□□□ -0.48
TOM1-202ENST00000395736 UBA7P41226 1012 aa12.05□□□□□ -0.48
TOM1-202ENST00000395736 CREMQ03060 361 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms