RNA–Protein interactions for RNA: ENST00000395324.6

VDR-202, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VDR, Length 4,762 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-202ENST00000395324 TRIM54Q9BYV2 358 aa13.21□□□□□ -0.3
VDR-202ENST00000395324 NCK2O43639 380 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 UPP2O95045 317 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 SNF8Q96H20 258 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 UBQLN1Q9UMX0 589 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 MAPK13O15264 365 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 CTIFO43310 598 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 PDGFRBP09619 1106 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 PMS2P54278 862 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 COPS2P61201 443 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 RMDN1Q96DB5 314 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 ZNF512Q96ME7 567 aaPredicted RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 IL25Q9H293 177 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 E5RI56 91 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 PDIA2Q13087 525 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 NBPF9Q3BBW0 867 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 ZC3H18Q86VM9 953 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 ZNF677Q86XU0 584 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 DPF2Q92785 391 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 KCNB2Q92953 911 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 G3BP2Q9UN86 482 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 BCL9O00512 1426 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 DDTLA6NHG4 134 aaPredicted RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 CXCL11O14625 94 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 PRRG1O14668 218 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 GSTA4O15217 222 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 OGTO15294 1046 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 RGS7P49802 495 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 SESN3P58005 492 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
VDR-202ENST00000395324 DCAF4L1Q3SXM0 396 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 IZUMO3Q5VZ72 239 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 PDZD8Q8NEN9 1154 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 MAML1Q92585 1016 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 FGFR1OP2Q9NVK5 253 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 SLC13A4Q9UKG4 626 aa13.2□□□□□ -0.3
VDR-202ENST00000395324 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 PLSCR1O15162 318 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 FBXO38Q6PIJ6 1188 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 CD302Q8IX05 232 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 C17orf102A2RUQ5 167 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 STAG3L1P0CL83 205 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 VCAM1P19320 739 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 CACNB2Q08289 660 aaPredicted RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 MMS22LQ6ZRQ5 1243 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 STKLD1Q8NE28 680 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 SPATA4Q8NEY3 305 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 TBX20Q9UMR3 447 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 TMEM247A6NEH6 219 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 C3orf70A6NLC5 250 aaPredicted RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 TTC36A6NLP5 189 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 PNMA6AP0CW24 399 aaPredicted RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 HOXA10P31260 410 aaPredicted RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 TAF6P49848 677 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 SULT1E1P49888 294 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 NR1I3Q14994 352 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 NAB2Q15742 525 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 ARRDC4Q8NCT1 418 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 SLC30A5Q8TAD4 765 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 C1orf54Q8WWF1 131 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 HPDLQ96IR7 371 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 GBP5Q96PP8 586 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 SLITRK1Q96PX8 696 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 CHP1Q99653 195 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 ORC6Q9Y5N6 252 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 RIMS1Q86UR5 1692 aaKnown RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 SLC9A1P19634 815 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 OR1G1P47890 313 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 ARSEP51690 589 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 SEC23AQ15436 765 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 ANO4Q32M45 955 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.19□□□□□ -0.3
VDR-202ENST00000395324 KIAA1683Q9H0B3 1180 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 UPF3AQ9H1J1 476 aaKnown RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 AGPAT3Q9NRZ7 376 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 SNX12Q9UMY4 172 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
VDR-202ENST00000395324 FHOD1Q9Y613 1164 aa13.19□□□□□ -0.3
VDR-202ENST00000395324 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 ST8SIA6P61647 398 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 EFHC1Q5JVL4 640 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 EPM2AIP1Q7L775 607 aaPredicted RBP13.18□□□□□ -0.3
VDR-202ENST00000395324 ZBED8Q8IZ13 594 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 PCSK9Q8NBP7 692 aaKnown RBP13.18□□□□□ -0.3
VDR-202ENST00000395324 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
VDR-202ENST00000395324 UNC45AQ9H3U1 944 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 APOBEC2Q9Y235 224 aaKnown RBP13.18□□□□□ -0.3
VDR-202ENST00000395324 PSMD3O43242 534 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 DCTN3O75935 186 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 ANKRD20A4Q4UJ75 823 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 ANKRD20A8PQ5CZ79 823 aa13.18□□□□□ -0.3
VDR-202ENST00000395324 ANKRD20A2Q5SQ80 823 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms