RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 FUT10Q6P4F1 479 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 RBM23Q86U06 439 aaKnown RBP14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 UROC1Q96N76 676 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 ZMAT2Q96NC0 199 aaKnown RBP14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 PAAF1Q9BRP4 392 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 GPR62Q9BZJ7 368 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 CHST7Q9NS84 486 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 CACNG4Q9UBN1 327 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 USP25Q9UHP3 1055 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 PCDHB13Q9Y5F0 798 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 DENND4AQ7Z401 1863 aa14.58□□□□□ -0.08
HLA-DMA-202ENST00000395303 MYO10Q9HD67 2058 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 PVALEFA0A1B0GWK0 134 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 CASTOR2A6NHX0 329 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 H3BQ06 376 aaPredicted RBP14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 CLASP2O75122 1294 aaKnown RBP14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 SLFN14P0C7P3 912 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 MYBP10242 640 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 DSG1Q02413 1049 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 SOX4Q06945 474 aaPredicted RBP14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 UPP1Q16831 310 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 GLRA4Q5JXX5 417 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 CD300LGQ6UXG3 332 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 UNC13DQ70J99 1090 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 TAS1R1Q7RTX1 841 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 AUTS2Q8WXX7 1259 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 ACCSQ96QU6 501 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 TSPAN18Q96SJ8 248 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 FGFBP2Q9BYJ0 223 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 RXFP1Q9HBX9 757 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 SLC38A7Q9NVC3 462 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 TBC1D7Q9P0N9 293 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 EXOC7Q9UPT5 735 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 SSX2IPQ9Y2D8 614 aa14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.57□□□□□ -0.08
HLA-DMA-202ENST00000395303 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 A0A1B0GVL5 298 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 KIF4AO95239 1232 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 GCNT3O95395 438 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 CXCL8P10145 99 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 HARSP12081 509 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 TNFSF9P41273 254 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 MATR3P43243 847 aaKnown RBP eCLIP14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 GLUD2P49448 558 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 ASIC1P78348 528 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 KCNA1Q09470 495 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 ELAVL2Q12926 359 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 POSTNQ15063 836 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 ZBTB6Q15916 424 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 SEZ6Q53EL9 994 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 DCLRE1AQ6PJP8 1040 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 EPM2AIP1Q7L775 607 aaPredicted RBP14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 SMRP1Q8NCR6 262 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 SLC22A17Q8WUG5 538 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 DDX27Q96GQ7 796 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 KLHL5Q96PQ7 755 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 MSTO1Q9BUK6 570 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 MRPL17Q9NRX2 175 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 CD207Q9UJ71 328 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 CPSF3Q9UKF6 684 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 DOCK8Q8NF50 2099 aa14.56□□□□□ -0.08
HLA-DMA-202ENST00000395303 PRR33A8MZF0 331 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 TISP43B9A030 160 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 EIF3DO15371 548 aaKnown RBP eCLIP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 MBTPS2O43462 519 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 C1RP00736 705 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 URODP06132 367 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 CNPP09543 421 aaKnown RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 ADSSP30520 456 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 SSTR3P32745 418 aaPredicted RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 RPL9P32969 192 aaKnown RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 NDUFV1P49821 464 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 CLCNKBP51801 687 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 RBM10P98175 930 aaKnown RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 ZP2Q05996 745 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 SMAD4Q13485 552 aaKnown RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 ENOX2Q16206 610 aaKnown RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 USP41Q3LFD5 358 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 ZBTB41Q5SVQ8 909 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 ANKRD54Q6NXT1 300 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 PPFIBP1Q86W92 1011 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 CD302Q8IX05 232 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 CEP57L1Q8IYX8 460 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 C3orf58Q8NDZ4 430 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 RABGGTAQ92696 567 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 CASP10Q92851 521 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 IKZF4Q9H2S9 585 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 TMEM206Q9H813 350 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 FNIP2Q9P278 1114 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 AGO2Q9UKV8 859 aaKnown RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 CIZ1Q9ULV3 898 aaPredicted RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 BARX2Q9UMQ3 279 aaPredicted RBP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 HCFC2Q9Y5Z7 792 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 SF3B1O75533 1304 aaKnown RBP eCLIP14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 TSC2P49815 1807 aa14.55□□□□□ -0.08
HLA-DMA-202ENST00000395303 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
HLA-DMA-202ENST00000395303 LACTBL1A8MY62 500 aa14.54□□□□□ -0.08
HLA-DMA-202ENST00000395303 KLRC4O43908 158 aa14.54□□□□□ -0.08
HLA-DMA-202ENST00000395303 TADA2AO75478 443 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms