RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 UPF3BQ9BZI7 483 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 SENP6Q9GZR1 1112 aaPredicted RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 NYXQ9GZU5 481 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PAIP1Q9H074 479 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 SEMA6BQ9H3T3 888 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 HMG20BQ9P0W2 317 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 ADD3Q9UEY8 706 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 VPS28Q9UK41 221 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 DDX19BQ9UMR2 479 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MYO1CO00159 1063 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MAPKBP1O60336 1514 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 RHOQP17081 205 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 TNFSF4P23510 183 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 GIPRP48546 466 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 RPP38P78345 283 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 CAP1Q01518 475 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 TUBA3CQ13748 450 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 GRIN2CQ14957 1233 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 TCTE1Q5JU00 501 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MAP3K21Q5TCX8 1036 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 IYDQ6PHW0 289 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 SLC2A7Q6PXP3 512 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 UNC5CLQ8IV45 518 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 ANKS4BQ8N8V4 417 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 RUBCNQ92622 972 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 HTRA1Q92743 480 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 SETD5Q9C0A6 1442 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 ADNPQ9H2P0 1102 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PSTPIP2Q9H939 334 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 LY9Q9HBG7 655 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 FBXO40Q9UH90 709 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 AMACRQ9UHK6 382 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MAP3K4Q9Y6R4 1608 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 AATKQ6ZMQ8 1374 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 UPK3BL1B0FP48 263 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 UPK3BL2E5RIL1 263 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 DDX39AO00148 427 aaKnown RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 SLC25A17O43808 307 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 PQBP1O60828 265 aaKnown RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 LRG1P02750 347 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ADSLP30566 484 aaPredicted RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 NF2P35240 595 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 TRA2BP62995 288 aaKnown RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 ADIPOQQ15848 244 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 Q3ZCU0 254 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 XKR9Q5GH70 373 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ZNF704Q6ZNC4 412 aaPredicted RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 CEP128Q6ZU80 1094 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ADGRG6Q86SQ4 1221 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 FAM160B2Q86V87 743 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 LRRTM4Q86VH4 590 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 LRRC34Q8IZ02 419 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 SPARTQ8N0X7 666 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 SYN2Q92777 582 aaPredicted RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 BRIP1Q9BX63 1249 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 THAP9Q9H5L6 903 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 SCPEP1Q9HB40 452 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 BMP2KQ9NSY1 1161 aaPredicted RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 TMEM5Q9Y2B1 443 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 KDM5BQ9UGL1 1544 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ZNF608Q9ULD9 1512 aaPredicted RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 IGSF1Q8N6C5 1336 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 NCF1BA6NI72 391 aaPredicted RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 ACOD1A6NK06 481 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 NCF1CA8MVU1 366 aaPredicted RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 TARM1B6A8C7 271 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 GOLGA8MH3BSY2 632 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 PDLIM1O00151 329 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 PPEF2O14830 753 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 AP1G1O43747 822 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 DGAT1O75907 488 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 RETP07949 1114 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 USP17L7P0C7H9 530 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 TTKP33981 857 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 EIF4A1P60842 406 aaKnown RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 KCNAB2Q13303 367 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 HABP2Q14520 560 aaPredicted RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 XKR3Q5GH77 459 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 GLRX5Q86SX6 157 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 PTRH1Q86Y79 214 aaKnown RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 P3H2Q8IVL5 708 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 CACNA2D3Q8IZS8 1091 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ANKS1AQ92625 1134 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 PRRX2Q99811 253 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ISCUQ9H1K1 167 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 TFB2MQ9H5Q4 396 aaKnown RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 KCND1Q9NSA2 647 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 TAS2R3Q9NYW6 316 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 ACTR3BQ9P1U1 418 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 TNFSF13BQ9Y275 285 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 TLR6Q9Y2C9 796 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 PCDHGA11Q9Y5H2 935 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 LTBP3Q9NS15 1303 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 OR6C74A6NCV1 312 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 FOXP2O15409 715 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 EPB41P11171 864 aaKnown RBP4.55□□□□□ -1.68
HERC4-204ENST00000395198 DSC2Q02487 901 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 MAP7Q14244 749 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 EML3Q32P44 896 aa4.55□□□□□ -1.68
HERC4-204ENST00000395198 EFHC1Q5JVL4 640 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms